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6UJ8

Crystal structure of HLA-B*07:02 with wild-type IDH2 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
B0006955biological_processimmune response
B0042612cellular_componentMHC class I protein complex
E0006955biological_processimmune response
E0042612cellular_componentMHC class I protein complex
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PEG A 301
ChainResidue
AASP29
AASP30
A1PE302
BTYR83

site_idAC2
Number of Residues7
Detailsbinding site for residue 1PE A 302
ChainResidue
BSER72
BTYR83
ATYR27
AARG48
APRO235
APHE241
APEG301

site_idAC3
Number of Residues6
Detailsbinding site for residue PEG A 303
ChainResidue
AGLU163
AGLU166
ATRP167
AHOH419
AHOH450
DGLU154

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 A 304
ChainResidue
AGLU232
ATHR233
ALYS243

site_idAC5
Number of Residues2
Detailsbinding site for residue PEG B 201
ChainResidue
BSER77
BLYS78

site_idAC6
Number of Residues6
Detailsbinding site for residue PGE B 202
ChainResidue
APHE8
AMET98
AGLN115
BPHE76
BSER77
BLYS78

site_idAC7
Number of Residues2
Detailsbinding site for residue PEG B 203
ChainResidue
BILE27
BLYS111

site_idAC8
Number of Residues7
Detailsbinding site for residue PG4 D 301
ChainResidue
DTYR27
DASP29
DASP30
DTHR233
DPHE241
DPEG302
EHOH318

site_idAC9
Number of Residues3
Detailsbinding site for residue PEG D 302
ChainResidue
DPG4301
DSO4303
DHOH447

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 D 303
ChainResidue
DPEG302
DHOH414

site_idAD2
Number of Residues2
Detailsbinding site for residue PEG E 201
ChainResidue
EPRO25
ELYS111

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
ChainResidueDetails
BTYR98-HIS104
ATYR257-HIS263

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P33198
ChainResidueDetails
CSER1
DTHR143
DLYS146
DGLU152
DTYR159
DTYR171
FSER1
ATHR143
ALYS146
AGLU152
ATYR159
ATYR171
DASN63
DTYR84

site_idSWS_FT_FI2
Number of Residues2
DetailsCARBOHYD: N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
ChainResidueDetails
BILE21
EILE21

site_idSWS_FT_FI3
Number of Residues12
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
ChainResidueDetails
BLYS39
ELYS78
ELYS111
ELYS114
BLYS61
BLYS68
BLYS78
BLYS111
BLYS114
ELYS39
ELYS61
ELYS68

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PDB entries from 2025-06-11

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