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6U45

Crystal structure of Methanoperedens nitroreducens elongation factor 2 bound to GMPPCP and magnesium

Functional Information from GO Data
ChainGOidnamespacecontents
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006414biological_processtranslational elongation
A0046872molecular_functionmetal ion binding
A1990904cellular_componentribonucleoprotein complex
B0003746molecular_functiontranslation elongation factor activity
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006412biological_processtranslation
B0006414biological_processtranslational elongation
B0046872molecular_functionmetal ion binding
B1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue GCP A 801
ChainResidue
AILE30
AGLY97
AASN148
ALYS149
AASP151
AARG152
ASER203
AALA204
ALEU205
AMG802
AHOH909
AASP31
AHOH1001
AHOH1019
AHOH1029
AHOH1081
AHIS32
AGLY33
ALYS34
ATHR35
ATHR36
AILE70
ATHR71

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 802
ChainResidue
ATHR35
ATHR71
AGCP801
AHOH909
AHOH1019

site_idAC3
Number of Residues3
Detailsbinding site for residue CL A 803
ChainResidue
AGLN495
AILE498
ALYS581

site_idAC4
Number of Residues24
Detailsbinding site for residue GCP B 801
ChainResidue
BILE30
BASP31
BHIS32
BGLY33
BLYS34
BTHR35
BTHR36
BILE70
BTHR71
BGLY97
BASN148
BLYS149
BASP151
BARG152
BSER203
BALA204
BLEU205
BMG802
BHOH939
BHOH974
BHOH981
BHOH1019
BHOH1032
BHOH1104

site_idAC5
Number of Residues5
Detailsbinding site for residue MG B 802
ChainResidue
BTHR35
BTHR71
BGCP801
BHOH939
BHOH974

site_idAC6
Number of Residues3
Detailsbinding site for residue CL B 803
ChainResidue
BGLN495
BILE498
BLYS581

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DFdeeEQkRGITIdsA
ChainResidueDetails
AASP60-ALA75

224201

PDB entries from 2024-08-28

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