6U45
Crystal structure of Methanoperedens nitroreducens elongation factor 2 bound to GMPPCP and magnesium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 93.699, 134.375, 150.485 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 100.231 - 2.350 |
R-factor | 0.1713 |
Rwork | 0.168 |
R-free | 0.22440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Methanoperedens nitroreducens elongation factor 2 H595N (triclinic crystal form) |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3211) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 150.500 | 2.400 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.072 | 0.715 |
Number of reflections | 79562 | 4201 |
<I/σ(I)> | 15 | 1.2 |
Completeness [%] | 99.5 | |
Redundancy | 10.3 | |
CC(1/2) | 0.998 | 0.715 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 100 mM HEPES or imidazole, pH 8.3, 200 mM sodium malonate, 16-18 % (w/v) PEG4000, 9 mM GppCp, and 15 mM MgCl2 |