6TVV
Crystal structure of 3'-5' RecJ exonuclease from M. Jannaschii
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004527 | molecular_function | exonuclease activity |
| A | 0006260 | biological_process | DNA replication |
| A | 0006310 | biological_process | DNA recombination |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0045145 | molecular_function | single-stranded DNA 5'-3' DNA exonuclease activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004527 | molecular_function | exonuclease activity |
| B | 0006260 | biological_process | DNA replication |
| B | 0006310 | biological_process | DNA recombination |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0045145 | molecular_function | single-stranded DNA 5'-3' DNA exonuclease activity |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MN A 501 |
| Chain | Residue |
| A | ASP34 |
| A | ASP84 |
| A | HIS105 |
| A | ASP164 |
| A | MN502 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue MN A 502 |
| Chain | Residue |
| A | HIS30 |
| A | ASP32 |
| A | ASP84 |
| A | MN501 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | GOL504 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue GOL A 504 |
| Chain | Residue |
| A | GLY398 |
| A | GOL503 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue GOL A 505 |
| Chain | Residue |
| B | PHE53 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue MN B 501 |
| Chain | Residue |
| B | ASP34 |
| B | ASP84 |
| B | HIS105 |
| B | ASP164 |
| B | MN502 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue MN B 502 |
| Chain | Residue |
| B | HIS30 |
| B | ASP32 |
| B | ASP84 |
| B | MN501 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 372 |
| Details | Region: {"description":"DHH N-terminal domain","evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 174 |
| Details | Region: {"description":"CID domain","evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 52 |
| Details | Region: {"description":"DHH C-terminal domain","evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 46 |
| Details | Region: {"description":"Linker","evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"38657529","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6TVV","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7YOS","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7YKV","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38762184","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7YKV","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
