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6TMF

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Functional Information from GO Data
ChainGOidnamespacecontents
B0003735molecular_functionstructural constituent of ribosome
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0015935cellular_componentsmall ribosomal subunit
B1990904cellular_componentribonucleoprotein complex
C0003676molecular_functionnucleic acid binding
C0003723molecular_functionRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0015935cellular_componentsmall ribosomal subunit
C0019843molecular_functionrRNA binding
C0022627cellular_componentcytosolic small ribosomal subunit
C1990904cellular_componentribonucleoprotein complex
D0003735molecular_functionstructural constituent of ribosome
D0005840cellular_componentribosome
D0006412biological_processtranslation
D1990904cellular_componentribonucleoprotein complex
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0015935cellular_componentsmall ribosomal subunit
E0019843molecular_functionrRNA binding
E0042274biological_processribosomal small subunit biogenesis
E0043226cellular_componentorganelle
E1990904cellular_componentribonucleoprotein complex
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F0022627cellular_componentcytosolic small ribosomal subunit
F1990904cellular_componentribonucleoprotein complex
G0003723molecular_functionRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0015935cellular_componentsmall ribosomal subunit
G0019843molecular_functionrRNA binding
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0003735molecular_functionstructural constituent of ribosome
H0005840cellular_componentribosome
H0006412biological_processtranslation
H1990904cellular_componentribonucleoprotein complex
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0015935cellular_componentsmall ribosomal subunit
I0019843molecular_functionrRNA binding
I1990904cellular_componentribonucleoprotein complex
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0019843molecular_functionrRNA binding
J1990904cellular_componentribonucleoprotein complex
K0003735molecular_functionstructural constituent of ribosome
K0005840cellular_componentribosome
K0006412biological_processtranslation
K1990904cellular_componentribonucleoprotein complex
L0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L0003723molecular_functionRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0015935cellular_componentsmall ribosomal subunit
L0022627cellular_componentcytosolic small ribosomal subunit
L1990904cellular_componentribonucleoprotein complex
M0000049molecular_functiontRNA binding
M0003723molecular_functionRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0015935cellular_componentsmall ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0003723molecular_functionRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0019843molecular_functionrRNA binding
N1990904cellular_componentribonucleoprotein complex
O0003723molecular_functionRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0015935cellular_componentsmall ribosomal subunit
O0019843molecular_functionrRNA binding
O1990904cellular_componentribonucleoprotein complex
P0003676molecular_functionnucleic acid binding
P0003723molecular_functionRNA binding
P0003735molecular_functionstructural constituent of ribosome
P0005829cellular_componentcytosol
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0015935cellular_componentsmall ribosomal subunit
P0019843molecular_functionrRNA binding
P1990904cellular_componentribonucleoprotein complex
Q0002181biological_processcytoplasmic translation
Q0003723molecular_functionRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0008270molecular_functionzinc ion binding
Q0015935cellular_componentsmall ribosomal subunit
Q0019843molecular_functionrRNA binding
Q0022627cellular_componentcytosolic small ribosomal subunit
Q0046872molecular_functionmetal ion binding
Q1990904cellular_componentribonucleoprotein complex
R0003735molecular_functionstructural constituent of ribosome
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0022627cellular_componentcytosolic small ribosomal subunit
R0070181molecular_functionsmall ribosomal subunit rRNA binding
R1990904cellular_componentribonucleoprotein complex
S0003723molecular_functionRNA binding
S0003735molecular_functionstructural constituent of ribosome
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0019843molecular_functionrRNA binding
S0022627cellular_componentcytosolic small ribosomal subunit
S1990904cellular_componentribonucleoprotein complex
T0003735molecular_functionstructural constituent of ribosome
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T1990904cellular_componentribonucleoprotein complex
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0015935cellular_componentsmall ribosomal subunit
V0000028biological_processribosomal small subunit assembly
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0022627cellular_componentcytosolic small ribosomal subunit
V1990904cellular_componentribonucleoprotein complex
X0003735molecular_functionstructural constituent of ribosome
X0005840cellular_componentribosome
X0006412biological_processtranslation
X1990904cellular_componentribonucleoprotein complex
Y0003735molecular_functionstructural constituent of ribosome
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0008270molecular_functionzinc ion binding
Y0046872molecular_functionmetal ion binding
Y1990904cellular_componentribonucleoprotein complex
Z0003735molecular_functionstructural constituent of ribosome
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0008270molecular_functionzinc ion binding
Z0046872molecular_functionmetal ion binding
Z1990904cellular_componentribonucleoprotein complex
a0000028biological_processribosomal small subunit assembly
a0003735molecular_functionstructural constituent of ribosome
a0005840cellular_componentribosome
a0006412biological_processtranslation
a0022627cellular_componentcytosolic small ribosomal subunit
a0030490biological_processmaturation of SSU-rRNA
a1990904cellular_componentribonucleoprotein complex
b0001682biological_processtRNA 5'-leader removal
b0003723molecular_functionRNA binding
b0003735molecular_functionstructural constituent of ribosome
b0004526molecular_functionribonuclease P activity
b0005737cellular_componentcytoplasm
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0008033biological_processtRNA processing
b0019843molecular_functionrRNA binding
b0042254biological_processribosome biogenesis
b1990904cellular_componentribonucleoprotein complex
c0005840cellular_componentribosome
d0000166molecular_functionnucleotide binding
d0005506molecular_functioniron ion binding
d0005515molecular_functionprotein binding
d0005524molecular_functionATP binding
d0006413biological_processtranslational initiation
d0006415biological_processtranslational termination
d0016491molecular_functionoxidoreductase activity
d0016887molecular_functionATP hydrolysis activity
d0043024molecular_functionribosomal small subunit binding
d0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue MG A 1501
ChainResidue
AG16

site_idAC2
Number of Residues1
Detailsbinding site for residue MG A 1502
ChainResidue
AC27

site_idAC3
Number of Residues1
Detailsbinding site for residue MG A 1503
ChainResidue
AU91

site_idAC4
Number of Residues1
Detailsbinding site for residue MG A 1504
ChainResidue
AA47

site_idAC5
Number of Residues2
Detailsbinding site for residue MG A 1505
ChainResidue
AG805
AG816

site_idAC6
Number of Residues4
Detailsbinding site for residue MG A 1506
ChainResidue
AG832
AC17
AU503
AU831

site_idAC7
Number of Residues3
Detailsbinding site for residue MG A 1507
ChainResidue
AA725
AA737
AC1467

site_idAC8
Number of Residues4
Detailsbinding site for residue MG A 1508
ChainResidue
AA1445
AA1446
AG1454
AC1467

site_idAC9
Number of Residues4
Detailsbinding site for residue MG A 1509
ChainResidue
AA1446
AG1451
AA1453
AG1454

site_idAD1
Number of Residues3
Detailsbinding site for residue MG A 1510
ChainResidue
AA1445
AA1446
AG1451

site_idAD2
Number of Residues3
Detailsbinding site for residue MG A 1511
ChainResidue
AA93
AG94
AC274

site_idAD3
Number of Residues1
Detailsbinding site for residue MG A 1512
ChainResidue
AA190

site_idAD4
Number of Residues3
Detailsbinding site for residue MG A 1513
ChainResidue
AC49
AC337
AA338

site_idAD5
Number of Residues4
Detailsbinding site for residue MG A 1514
ChainResidue
AU513
AA514
AA515
AA516

site_idAD6
Number of Residues1
Detailsbinding site for residue MG A 1515
ChainResidue
AA550

site_idAD7
Number of Residues3
Detailsbinding site for residue MG A 1516
ChainResidue
AU882
AA883
AC1291

site_idAD8
Number of Residues2
Detailsbinding site for residue MG A 1517
ChainResidue
AA885
AA886

site_idAD9
Number of Residues1
Detailsbinding site for residue MG A 1518
ChainResidue
AG924

site_idAE1
Number of Residues2
Detailsbinding site for residue MG A 1519
ChainResidue
AC1010
AG1035

site_idAE2
Number of Residues1
Detailsbinding site for residue MG A 1520
ChainResidue
AG1051

site_idAE3
Number of Residues3
Detailsbinding site for residue MG A 1521
ChainResidue
AA1106
AC1107
AG1133

site_idAE4
Number of Residues3
Detailsbinding site for residue MG A 1522
ChainResidue
AC995
AG1146
AG1147

site_idAE5
Number of Residues3
Detailsbinding site for residue MG A 1523
ChainResidue
AC995
AA1145
AG1146

site_idAE6
Number of Residues3
Detailsbinding site for residue MG A 1524
ChainResidue
AA1187
AA1248
AC1284

site_idAE7
Number of Residues3
Detailsbinding site for residue MG A 1525
ChainResidue
AC1252
AG1253
AG1254

site_idAE8
Number of Residues2
Detailsbinding site for residue MG A 1526
ChainResidue
AU445
AG446

site_idAE9
Number of Residues2
Detailsbinding site for residue MG A 1527
ChainResidue
AG6
AG7

site_idAF1
Number of Residues4
Detailsbinding site for residue ZN Q 101
ChainResidue
QCYS21
QCYS24
QCYS39
QCYS42

site_idAF2
Number of Residues5
Detailsbinding site for residue ZN W 101
ChainResidue
WCYS28
WCYS31
WGLY32
WCYS51
WCYS54

site_idAF3
Number of Residues4
Detailsbinding site for residue ZN W 102
ChainResidue
WCYS10
WCYS13
WCYS39
WCYS42

site_idAF4
Number of Residues4
Detailsbinding site for residue ZN Y 101
ChainResidue
YCYS20
YASN25
YCYS39
YCYS42

site_idAF5
Number of Residues8
Detailsbinding site for residue SF4 d 601
ChainResidue
dCYS24
dILE34
dCYS51
dILE52
dGLY53
dCYS54
dGLY55
dCYS57

site_idAF6
Number of Residues8
Detailsbinding site for residue SF4 d 602
ChainResidue
dCYS11
dLYS12
dCYS16
dCYS20
dPRO44
dCYS61
dTYR63
dILE66

site_idAF7
Number of Residues17
Detailsbinding site for residue ANP d 603
ChainResidue
dASN108
dGLY109
dVAL110
dGLY111
dLYS112
dTHR113
dTHR114
dGLN167
dHIS269
dASP459
dSER461
dGLY462
dGLY463
dGLU464
dMG604
dTYR83
dPHE88

site_idAF8
Number of Residues3
Detailsbinding site for residue MG d 604
ChainResidue
dTHR113
dGLN167
dANP603

site_idAF9
Number of Residues19
Detailsbinding site for residue ANP d 605
ChainResidue
dLYS208
dILE212
dSER214
dGLY215
dGLY216
dTYR242
dLEU353
dPHE356
dASN377
dGLY378
dILE379
dGLY380
dLYS381
dTHR382
dTHR383
dGLN411
dHIS518
dGLU538
dMG606

site_idAG1
Number of Residues3
Detailsbinding site for residue MG d 606
ChainResidue
dTHR382
dGLN411
dANP605

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DRSGGKAIElsEI
ChainResidueDetails
dASP27-ILE39

site_idPS00047
Number of Residues5
DetailsHISTONE_H4 Histone H4 signature. GAKRH
ChainResidueDetails
FGLY5-HIS9

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. KgTvneILtkiderGKKdevkeLLnmT
ChainResidueDetails
dLYS177-THR203

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GilIVSTSqGVMthkeAI
ChainResidueDetails
JGLY100-ILE117

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALarA.GLrIgrveDvTPiPHD
ChainResidueDetails
NILE104-ASP126

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAmR
ChainResidueDetails
OLYS63-ARG70

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDrVlVaEtRPIS
ChainResidueDetails
SGLY82-SER94

site_idPS00198
Number of Residues12
Details4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCGiCVkKCP
ChainResidueDetails
dCYS51-PRO62

site_idPS00228
Number of Residues4
DetailsTUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MREI
ChainResidueDetails
SMET1-ILE4

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKefvpveIkeemIGhyLGEFalT
ChainResidueDetails
UASN86-THR110

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGfmGQaeAarvAiARAL
ChainResidueDetails
LGLY68-LEU86

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AertGVrmsGPIpLPT
ChainResidueDetails
MALA27-THR42

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LrkHLemhPkDrhSmrgLqlTeskirrLvkY
ChainResidueDetails
RLEU98-TYR128

site_idPS00527
Number of Residues22
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.Cgqygpvirvhg.LMLCRhCFR
ChainResidueDetails
QARG23-ARG44

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPdqWyIsR
ChainResidueDetails
FHIS9-ARG23

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGsrVSrGYAkAYESkermlyiE
ChainResidueDetails
XPHE60-GLU82

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrirFrVlaAVGNrd.GyVGlGighgr.EVgi.AI
ChainResidueDetails
GGLY71-ILE103

site_idPS00628
Number of Residues20
DetailsRIBOSOMAL_S19E Ribosomal protein S19e signature. PehfykaGgsIiRkALQqLE
ChainResidueDetails
VPRO87-GLU106

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LDrRLqtiVYKkglArTprqARqLI
ChainResidueDetails
ELEU101-ILE125

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHelGlpLRGQ
ChainResidueDetails
PARG117-GLN130

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. VtSKtIRNrIAGYiTK
ChainResidueDetails
TVAL41-LYS56

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ETEREAReI
ChainResidueDetails
aGLU58-ILE66

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. LdQYLAAGVHIG
ChainResidueDetails
BLEU8-GLY19

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdvLIVtDpraDhqaMkEaieiGIP
ChainResidueDetails
BPRO111-PRO135

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekeIPYiyVpSKkeLG
ChainResidueDetails
bCYS70-GLY87

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCidCgneqivFSnPsttvrClvCGatLvePtG
ChainResidueDetails
YLYS19-GLY51

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. ViGRViEtTLrDL
ChainResidueDetails
DVAL47-LEU59

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. KkpSGGriila.RkKrKrELG
ChainResidueDetails
KLYS10-GLY29

237423

PDB entries from 2025-06-11

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