Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6TFL

Lsm protein (SmAP) from Halobacterium salinarum

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0046872	molecular_function	metal ion binding
B	0003723	molecular_function	RNA binding
B	0046872	molecular_function	metal ion binding
C	0003723	molecular_function	RNA binding
C	0046872	molecular_function	metal ion binding
D	0003723	molecular_function	RNA binding
D	0046872	molecular_function	metal ion binding
E	0003723	molecular_function	RNA binding
E	0046872	molecular_function	metal ion binding
F	0003723	molecular_function	RNA binding
F	0046872	molecular_function	metal ion binding
G	0003723	molecular_function	RNA binding
G	0046872	molecular_function	metal ion binding
H	0003723	molecular_function	RNA binding
H	0046872	molecular_function	metal ion binding
I	0003723	molecular_function	RNA binding
I	0046872	molecular_function	metal ion binding
J	0003723	molecular_function	RNA binding
J	0046872	molecular_function	metal ion binding
K	0003723	molecular_function	RNA binding
K	0046872	molecular_function	metal ion binding
L	0003723	molecular_function	RNA binding
L	0046872	molecular_function	metal ion binding
M	0003723	molecular_function	RNA binding
M	0046872	molecular_function	metal ion binding
N	0003723	molecular_function	RNA binding
N	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue CA A 101

Chain	Residue
A	GLU43
A	HOH204
D	LEU13
D	GLU14
D	HOH219

site_id	AC2
Number of Residues	3
Details	binding site for residue CA A 102

Chain	Residue
A	GLU11
A	GLU15
A	HOH211

site_id	AC3
Number of Residues	9
Details	binding site for residue URI A 103

Chain	Residue
A	ASN39
A	ARG51
A	GLY52
A	ASP53
D	ARG51
D	URI105
G	GLN36
G	URI102
A	HIS37

site_id	AC4
Number of Residues	6
Details	binding site for residue CA B 101

Chain	Residue
B	GLU11
B	GLU15
B	HOH213
L	GLU11
L	GLU15
L	HOH217

site_id	AC5
Number of Residues	3
Details	binding site for residue CA B 102

Chain	Residue
B	GLU11
B	HOH216
B	HOH217

site_id	AC6
Number of Residues	8
Details	binding site for residue URI B 103

Chain	Residue
B	HIS37
B	ASN39
B	ARG51
B	GLY52
B	ASP53
C	GLN36
C	URI101
G	URI102

site_id	AC7
Number of Residues	9
Details	binding site for residue URI C 101

Chain	Residue
B	ARG51
B	URI103
C	HIS37
C	ASN39
C	ARG51
C	GLY52
C	ASP53
F	GLN36
F	URI102

site_id	AC8
Number of Residues	6
Details	binding site for residue CA D 101

Chain	Residue
D	THR16
D	PRO60
D	HOH209
D	HOH222
G	THR16
G	PRO60

site_id	AC9
Number of Residues	7
Details	binding site for residue CA D 102

Chain	Residue
A	PRO60
A	HOH217
A	HOH218
D	THR47
D	HOH203
D	HOH221
D	HOH223

site_id	AD1
Number of Residues	5
Details	binding site for residue CA D 103

Chain	Residue
D	GLU11
D	GLU15
G	HOH209
G	HOH212
G	HOH219

site_id	AD2
Number of Residues	2
Details	binding site for residue CA D 104

Chain	Residue
D	HOH225
D	HOH226

site_id	AD3
Number of Residues	6
Details	binding site for residue URI D 105

Chain	Residue
A	URI103
D	HIS37
D	ASN39
D	ARG51
E	ARG51
E	URI103

site_id	AD4
Number of Residues	2
Details	binding site for residue CA E 101

Chain	Residue
J	HOH212
J	HOH213

site_id	AD5
Number of Residues	3
Details	binding site for residue CA E 102

Chain	Residue
E	GLU11
E	GLU15
E	HOH216

site_id	AD6
Number of Residues	9
Details	binding site for residue URI E 103

Chain	Residue
D	GLN36
D	URI105
E	HIS37
E	ASN39
E	ARG51
E	GLY52
E	ASP53
F	ARG51
F	URI102

site_id	AD7
Number of Residues	1
Details	binding site for residue CA F 101

Chain	Residue
F	THR47

site_id	AD8
Number of Residues	7
Details	binding site for residue URI F 102

Chain	Residue
C	URI101
E	GLN36
E	URI103
F	HIS37
F	ASN39
F	ARG51
F	ASP53

site_id	AD9
Number of Residues	6
Details	binding site for residue GOL G 101

Chain	Residue
E	GLU43
E	HOH202
G	GLU11
G	LEU13
G	GLU14
G	GLU15

site_id	AE1
Number of Residues	8
Details	binding site for residue URI G 102

Chain	Residue
B	URI103
G	HIS37
G	ASN39
G	ARG51
G	GLY52
G	ASP53
A	ARG51
A	URI103

site_id	AE2
Number of Residues	4
Details	binding site for residue CA H 101

Chain	Residue
H	GLU11
H	GLU15
H	HOH208
H	HOH219

site_id	AE3
Number of Residues	3
Details	binding site for residue CA H 102

Chain	Residue
H	GLU11
H	HOH222
N	HOH221

site_id	AE4
Number of Residues	5
Details	binding site for residue CA H 103

Chain	Residue
H	THR47
H	HOH205
H	HOH226
N	PRO60
N	HOH220

site_id	AE5
Number of Residues	6
Details	binding site for residue URI H 104

Chain	Residue
H	HIS37
H	ASN39
H	ARG51
H	ASP53
K	URI103
N	URI105

site_id	AE6
Number of Residues	5
Details	binding site for residue CA I 101

Chain	Residue
F	PRO60
F	HOH207
F	HOH220
I	THR47
I	HOH204

site_id	AE7
Number of Residues	3
Details	binding site for residue CA I 102

Chain	Residue
I	GLU11
K	HOH213
K	HOH219

site_id	AE8
Number of Residues	2
Details	binding site for residue CA I 103

Chain	Residue
I	GLU11
I	GLU15

site_id	AE9
Number of Residues	9
Details	binding site for residue URI I 104

Chain	Residue
I	HIS37
I	ASN39
I	ARG51
I	GLY52
I	ASP53
J	GLN36
J	URI102
N	ARG51
N	URI105

site_id	AF1
Number of Residues	6
Details	binding site for residue CA J 101

Chain	Residue
F	GLU11
F	GLU15
F	HOH215
J	GLU11
J	GLU15
J	HOH205

site_id	AF2
Number of Residues	9
Details	binding site for residue URI J 102

Chain	Residue
I	ARG51
I	URI104
J	HIS37
J	ASN39
J	ARG51
J	GLY52
J	ASP53
M	GLN36
M	URI102

site_id	AF3
Number of Residues	6
Details	binding site for residue CA K 101

Chain	Residue
H	PRO60
H	HOH209
K	THR47
K	HOH209
K	HOH217
N	HOH219

site_id	AF4
Number of Residues	2
Details	binding site for residue CA K 102

Chain	Residue
I	HOH216
K	GLU45

site_id	AF5
Number of Residues	7
Details	binding site for residue URI K 103

Chain	Residue
H	MET38
H	URI104
K	HIS37
K	ASN39
K	ARG51
K	ASP53
L	URI104

site_id	AF6
Number of Residues	2
Details	binding site for residue CA L 101

Chain	Residue
C	HOH212
L	HOH218

site_id	AF7
Number of Residues	4
Details	binding site for residue CA L 102

Chain	Residue
B	GLU15
L	GLU15
L	HOH214
L	HOH222

site_id	AF8
Number of Residues	2
Details	binding site for residue CA L 103

Chain	Residue
L	GLU11
L	HOH216

site_id	AF9
Number of Residues	6
Details	binding site for residue URI L 104

Chain	Residue
K	URI103
L	HIS37
L	ASN39
L	ARG51
L	ASP53
M	URI102

site_id	AG1
Number of Residues	4
Details	binding site for residue CA M 101

Chain	Residue
B	THR16
B	PRO60
M	HOH209
M	HOH215

site_id	AG2
Number of Residues	9
Details	binding site for residue URI M 102

Chain	Residue
J	ARG51
J	URI102
L	GLN36
L	URI104
M	HIS37
M	ASN39
M	ARG51
M	GLY52
M	ASP53

site_id	AG3
Number of Residues	7
Details	binding site for residue CA N 101

Chain	Residue
I	HOH212
I	HOH217
K	HOH202
N	THR47
N	HOH209
N	HOH224
N	HOH228

site_id	AG4
Number of Residues	3
Details	binding site for residue CA N 102

Chain	Residue
H	HOH211
N	GLU45
N	HOH223

site_id	AG5
Number of Residues	2
Details	binding site for residue CA N 103

Chain	Residue
N	GLU11
N	GLU15

site_id	AG6
Number of Residues	2
Details	binding site for residue CA N 104

Chain	Residue
N	GLU11
N	HOH225

site_id	AG7
Number of Residues	7
Details	binding site for residue URI N 105

Chain	Residue
H	URI104
I	GLN36
I	URI104
N	HIS37
N	ASN39
N	ARG51
N	ASP53

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)