6TEP
Crystal structure of a galactokinase from Bifidobacterium infantis in complex with ADP
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004335 | molecular_function | galactokinase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006012 | biological_process | galactose metabolic process |
A | 0016301 | molecular_function | kinase activity |
A | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
A | 0046835 | biological_process | carbohydrate phosphorylation |
A | 0046872 | molecular_function | metal ion binding |
B | 0004335 | molecular_function | galactokinase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006012 | biological_process | galactose metabolic process |
B | 0016301 | molecular_function | kinase activity |
B | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
B | 0046835 | biological_process | carbohydrate phosphorylation |
B | 0046872 | molecular_function | metal ion binding |
C | 0004335 | molecular_function | galactokinase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006012 | biological_process | galactose metabolic process |
C | 0016301 | molecular_function | kinase activity |
C | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
C | 0046835 | biological_process | carbohydrate phosphorylation |
C | 0046872 | molecular_function | metal ion binding |
D | 0004335 | molecular_function | galactokinase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006012 | biological_process | galactose metabolic process |
D | 0016301 | molecular_function | kinase activity |
D | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
D | 0046835 | biological_process | carbohydrate phosphorylation |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue PEG A 501 |
Chain | Residue |
A | LYS69 |
A | PRO70 |
A | ARG71 |
A | GLU72 |
A | ASP73 |
A | ASP126 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue GOL A 502 |
Chain | Residue |
A | LYS323 |
A | TYR360 |
A | HOH640 |
A | GLY320 |
A | ASP321 |
A | ILE322 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue GOL A 503 |
Chain | Residue |
A | GLU46 |
A | HIS47 |
A | THR48 |
A | ASP49 |
A | TYR50 |
A | TYR248 |
A | HOH666 |
A | HOH773 |
site_id | AC4 |
Number of Residues | 21 |
Details | binding site for residue ADP A 504 |
Chain | Residue |
A | SER80 |
A | TRP103 |
A | TYR106 |
A | LEU135 |
A | GLY136 |
A | GLY138 |
A | SER140 |
A | SER141 |
A | SER142 |
A | MET145 |
A | MG507 |
A | HOH634 |
A | HOH641 |
A | HOH646 |
A | HOH658 |
A | HOH690 |
A | HOH693 |
A | HOH698 |
A | HOH754 |
A | HOH826 |
A | HOH835 |
site_id | AC5 |
Number of Residues | 3 |
Details | binding site for residue CL A 505 |
Chain | Residue |
A | ARG251 |
A | THR254 |
A | ARG299 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue CL A 506 |
Chain | Residue |
A | ASP93 |
A | ARG115 |
A | HOH847 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue MG A 507 |
Chain | Residue |
A | SER142 |
A | ADP504 |
A | HOH641 |
A | HOH690 |
A | HOH835 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue PEG D 501 |
Chain | Residue |
D | ALA30 |
D | PRO31 |
D | GLU32 |
D | LYS69 |
D | PRO70 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue PEG D 502 |
Chain | Residue |
D | LYS121 |
D | VAL156 |
D | TYR157 |
D | GLY158 |
site_id | AD1 |
Number of Residues | 10 |
Details | binding site for residue PEG D 503 |
Chain | Residue |
D | ARG40 |
D | GLY138 |
D | SER186 |
D | THR187 |
D | ASP191 |
D | TYR248 |
D | GLY366 |
D | GLY367 |
D | GOL504 |
D | HOH606 |
site_id | AD2 |
Number of Residues | 10 |
Details | binding site for residue GOL D 504 |
Chain | Residue |
D | GLU46 |
D | HIS47 |
D | ASP49 |
D | TYR50 |
D | THR187 |
D | GLY188 |
D | TYR248 |
D | PEG503 |
D | HOH692 |
D | HOH820 |
site_id | AD3 |
Number of Residues | 21 |
Details | binding site for residue ADP D 505 |
Chain | Residue |
D | HOH771 |
D | HOH779 |
D | HOH817 |
D | SER80 |
D | VAL82 |
D | TRP103 |
D | TYR106 |
D | LEU135 |
D | GLY136 |
D | GLY138 |
D | SER140 |
D | SER141 |
D | SER142 |
D | MET145 |
D | MG507 |
D | HOH606 |
D | HOH625 |
D | HOH638 |
D | HOH669 |
D | HOH719 |
D | HOH759 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue CL D 506 |
Chain | Residue |
D | ARG251 |
D | THR254 |
D | ARG299 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue MG D 507 |
Chain | Residue |
D | SER142 |
D | ADP505 |
D | HOH602 |
D | HOH625 |
site_id | AD6 |
Number of Residues | 6 |
Details | binding site for residue PG4 C 501 |
Chain | Residue |
C | THR343 |
C | VAL344 |
C | PRO345 |
C | GLU346 |
C | HOH636 |
C | HOH877 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue PEG C 502 |
Chain | Residue |
C | GLY136 |
C | GLN238 |
C | ALA239 |
C | HIS241 |
C | HOH803 |
site_id | AD8 |
Number of Residues | 9 |
Details | binding site for residue PEG C 503 |
Chain | Residue |
C | ASP49 |
C | GLY188 |
C | GLY189 |
C | ASN193 |
C | CYS208 |
C | ASN217 |
C | HOH624 |
C | HOH831 |
C | HOH837 |
site_id | AD9 |
Number of Residues | 4 |
Details | binding site for residue GOL C 504 |
Chain | Residue |
C | GLN238 |
C | ALA400 |
C | HOH619 |
C | HOH825 |
site_id | AE1 |
Number of Residues | 9 |
Details | binding site for residue GOL C 505 |
Chain | Residue |
C | GLU46 |
C | HIS47 |
C | ASP49 |
C | TYR50 |
C | THR187 |
C | GLY188 |
C | TYR248 |
C | HOH711 |
C | HOH777 |
site_id | AE2 |
Number of Residues | 7 |
Details | binding site for residue GOL C 506 |
Chain | Residue |
A | LYS227 |
A | HOH608 |
A | HOH843 |
A | HOH928 |
C | ALA265 |
C | HOH612 |
C | HOH702 |
site_id | AE3 |
Number of Residues | 24 |
Details | binding site for residue ADP C 507 |
Chain | Residue |
C | SER80 |
C | VAL82 |
C | TRP103 |
C | TYR106 |
C | LEU135 |
C | GLY136 |
C | GLY138 |
C | SER140 |
C | SER141 |
C | SER142 |
C | MET145 |
C | MG509 |
C | HOH605 |
C | HOH609 |
C | HOH617 |
C | HOH631 |
C | HOH642 |
C | HOH656 |
C | HOH658 |
C | HOH659 |
C | HOH713 |
C | HOH717 |
C | HOH782 |
C | HOH859 |
site_id | AE4 |
Number of Residues | 4 |
Details | binding site for residue CL C 508 |
Chain | Residue |
C | GLN250 |
C | ARG251 |
C | THR254 |
C | ARG299 |
site_id | AE5 |
Number of Residues | 6 |
Details | binding site for residue MG C 509 |
Chain | Residue |
C | SER142 |
C | ADP507 |
C | HOH603 |
C | HOH609 |
C | HOH658 |
C | HOH713 |
site_id | AE6 |
Number of Residues | 7 |
Details | binding site for residue PEG B 501 |
Chain | Residue |
B | GLU294 |
B | LYS297 |
B | ARG301 |
B | HOH602 |
B | HOH603 |
B | HOH616 |
B | HOH707 |
site_id | AE7 |
Number of Residues | 7 |
Details | binding site for residue PEG B 502 |
Chain | Residue |
B | ARG77 |
B | VAL87 |
B | GLU89 |
B | HOH605 |
B | HOH636 |
B | HOH853 |
D | LYS395 |
site_id | AE8 |
Number of Residues | 3 |
Details | binding site for residue PEG B 503 |
Chain | Residue |
B | ASP163 |
B | HOH613 |
B | HOH639 |
site_id | AE9 |
Number of Residues | 6 |
Details | binding site for residue PEG B 504 |
Chain | Residue |
B | ASN193 |
B | ASN217 |
B | HOH610 |
B | HOH642 |
B | HOH655 |
B | HOH661 |
site_id | AF1 |
Number of Residues | 7 |
Details | binding site for residue PEG B 505 |
Chain | Residue |
B | GLY136 |
B | GLY138 |
B | GLN242 |
B | GLY368 |
B | PHE369 |
B | GLY371 |
B | HOH721 |
site_id | AF2 |
Number of Residues | 5 |
Details | binding site for residue GOL B 506 |
Chain | Residue |
B | LEU288 |
B | ASP289 |
B | LEU291 |
B | PRO292 |
B | LYS297 |
site_id | AF3 |
Number of Residues | 5 |
Details | binding site for residue GOL B 507 |
Chain | Residue |
B | ARG355 |
B | LYS356 |
B | ASN357 |
B | GLY358 |
B | HOH659 |
site_id | AF4 |
Number of Residues | 8 |
Details | binding site for residue GOL B 508 |
Chain | Residue |
B | GLU46 |
B | HIS47 |
B | ASP49 |
B | TYR50 |
B | LEU190 |
B | TYR248 |
B | HOH645 |
B | HOH798 |
site_id | AF5 |
Number of Residues | 21 |
Details | binding site for residue ADP B 509 |
Chain | Residue |
B | SER80 |
B | TRP103 |
B | TYR106 |
B | LEU135 |
B | GLY136 |
B | GLY138 |
B | SER140 |
B | SER141 |
B | SER142 |
B | MET145 |
B | MG511 |
B | HOH625 |
B | HOH665 |
B | HOH697 |
B | HOH700 |
B | HOH705 |
B | HOH721 |
B | HOH730 |
B | HOH796 |
B | HOH817 |
B | HOH820 |
site_id | AF6 |
Number of Residues | 3 |
Details | binding site for residue CL B 510 |
Chain | Residue |
B | ARG251 |
B | THR254 |
B | ARG299 |
site_id | AF7 |
Number of Residues | 4 |
Details | binding site for residue MG B 511 |
Chain | Residue |
B | SER142 |
B | ADP509 |
B | HOH700 |
B | HOH730 |
Functional Information from PROSITE/UniProt