6T7L
Crystal structure of AmpC from E.coli with Nacubactam (OP0595)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008800 | molecular_function | beta-lactamase activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0017001 | biological_process | antibiotic catabolic process |
A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
A | 0042597 | cellular_component | periplasmic space |
A | 0046677 | biological_process | response to antibiotic |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | binding site for residue MES A 401 |
Chain | Residue |
A | GLN22 |
A | LYS24 |
A | TYR40 |
A | PHE41 |
A | THR42 |
A | GLN56 |
A | HOH503 |
A | HOH550 |
A | HOH781 |
site_id | AC2 |
Number of Residues | 14 |
Details | binding site for residue OP0 A 402 |
Chain | Residue |
A | SER64 |
A | GLN120 |
A | TYR150 |
A | ASN152 |
A | TYR221 |
A | LYS315 |
A | THR316 |
A | GLY317 |
A | ALA318 |
A | ASN346 |
A | SO4405 |
A | HOH522 |
A | HOH661 |
A | HOH785 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue ZN A 403 |
Chain | Residue |
A | HIS13 |
A | HIS13 |
A | HIS13 |
A | CL407 |
A | CL407 |
A | CL407 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue ZN A 404 |
Chain | Residue |
A | HIS186 |
A | HOH531 |
A | HOH566 |
A | HOH765 |
A | HOH807 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue SO4 A 405 |
Chain | Residue |
A | ALA318 |
A | THR319 |
A | GLY320 |
A | ASN343 |
A | OP0402 |
A | HOH580 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue PGE A 406 |
Chain | Residue |
A | TRP93 |
A | LEU131 |
A | LYS164 |
A | HOH794 |
site_id | AC7 |
Number of Residues | 9 |
Details | binding site for residue CL A 407 |
Chain | Residue |
A | HIS13 |
A | HIS13 |
A | HIS13 |
A | ZN403 |
A | ZN403 |
A | ZN403 |
A | HOH789 |
A | HOH789 |
A | HOH789 |
Functional Information from PROSITE/UniProt
site_id | PS00336 |
Number of Residues | 8 |
Details | BETA_LACTAMASE_C Beta-lactamase class-C active site. FELGSVSK |
Chain | Residue | Details |
A | PHE60-LYS67 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | ACT_SITE: Acyl-ester intermediate => ECO:0000255|PROSITE-ProRule:PRU10102, ECO:0000269|PubMed:11478888, ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:16506777, ECO:0000269|PubMed:6795623, ECO:0000269|PubMed:9819201, ECO:0000269|DOI:10.1021/ja001676x |
Chain | Residue | Details |
A | SER64 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:16506777, ECO:0000269|DOI:10.1021/ja001676x, ECO:0007744|PDB:1FCN, ECO:0007744|PDB:2FFY |
Chain | Residue | Details |
A | SER64 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:12323371, ECO:0007744|PDB:1KVM, ECO:0007744|PDB:1LL9 |
Chain | Residue | Details |
A | GLN120 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:16506777, ECO:0007744|PDB:2FFY |
Chain | Residue | Details |
A | TYR150 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:12323371, ECO:0000269|PubMed:16506777, ECO:0000269|DOI:10.1021/ja001676x, ECO:0007744|PDB:1FCN, ECO:0007744|PDB:1KVM, ECO:0007744|PDB:1LL9, ECO:0007744|PDB:2FFY |
Chain | Residue | Details |
A | ASN152 | |
A | ALA318 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0007744|PDB:1KVM |
Chain | Residue | Details |
A | ASN343 |