Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6SUV

Horse cytochrome c complexed by octa-anionic calixarene

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
AaA	0005515	molecular_function	protein binding
AaA	0005739	cellular_component	mitochondrion
AaA	0005758	cellular_component	mitochondrial intermembrane space
AaA	0005829	cellular_component	cytosol
AaA	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
AaA	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
AaA	0006915	biological_process	apoptotic process
AaA	0008289	molecular_function	lipid binding
AaA	0009055	molecular_function	electron transfer activity
AaA	0018063	biological_process	cytochrome c-heme linkage
AaA	0020037	molecular_function	heme binding
AaA	0042802	molecular_function	identical protein binding
AaA	0043065	biological_process	positive regulation of apoptotic process
AaA	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
AaA	0046872	molecular_function	metal ion binding
AaA	0070069	cellular_component	cytochrome complex
AaA	0070469	cellular_component	respirasome
AaA	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
BaB	0005515	molecular_function	protein binding
BaB	0005739	cellular_component	mitochondrion
BaB	0005758	cellular_component	mitochondrial intermembrane space
BaB	0005829	cellular_component	cytosol
BaB	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
BaB	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
BaB	0006915	biological_process	apoptotic process
BaB	0008289	molecular_function	lipid binding
BaB	0009055	molecular_function	electron transfer activity
BaB	0018063	biological_process	cytochrome c-heme linkage
BaB	0020037	molecular_function	heme binding
BaB	0042802	molecular_function	identical protein binding
BaB	0043065	biological_process	positive regulation of apoptotic process
BaB	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
BaB	0046872	molecular_function	metal ion binding
BaB	0070069	cellular_component	cytochrome complex
BaB	0070469	cellular_component	respirasome
BaB	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
CaC	0005515	molecular_function	protein binding
CaC	0005739	cellular_component	mitochondrion
CaC	0005758	cellular_component	mitochondrial intermembrane space
CaC	0005829	cellular_component	cytosol
CaC	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
CaC	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
CaC	0006915	biological_process	apoptotic process
CaC	0008289	molecular_function	lipid binding
CaC	0009055	molecular_function	electron transfer activity
CaC	0018063	biological_process	cytochrome c-heme linkage
CaC	0020037	molecular_function	heme binding
CaC	0042802	molecular_function	identical protein binding
CaC	0043065	biological_process	positive regulation of apoptotic process
CaC	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
CaC	0046872	molecular_function	metal ion binding
CaC	0070069	cellular_component	cytochrome complex
CaC	0070469	cellular_component	respirasome
CaC	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
DaD	0005515	molecular_function	protein binding
DaD	0005739	cellular_component	mitochondrion
DaD	0005758	cellular_component	mitochondrial intermembrane space
DaD	0005829	cellular_component	cytosol
DaD	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
DaD	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
DaD	0006915	biological_process	apoptotic process
DaD	0008289	molecular_function	lipid binding
DaD	0009055	molecular_function	electron transfer activity
DaD	0018063	biological_process	cytochrome c-heme linkage
DaD	0020037	molecular_function	heme binding
DaD	0042802	molecular_function	identical protein binding
DaD	0043065	biological_process	positive regulation of apoptotic process
DaD	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
DaD	0046872	molecular_function	metal ion binding
DaD	0070069	cellular_component	cytochrome complex
DaD	0070469	cellular_component	respirasome
DaD	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
EaE	0005515	molecular_function	protein binding
EaE	0005739	cellular_component	mitochondrion
EaE	0005758	cellular_component	mitochondrial intermembrane space
EaE	0005829	cellular_component	cytosol
EaE	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
EaE	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
EaE	0006915	biological_process	apoptotic process
EaE	0008289	molecular_function	lipid binding
EaE	0009055	molecular_function	electron transfer activity
EaE	0018063	biological_process	cytochrome c-heme linkage
EaE	0020037	molecular_function	heme binding
EaE	0042802	molecular_function	identical protein binding
EaE	0043065	biological_process	positive regulation of apoptotic process
EaE	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
EaE	0046872	molecular_function	metal ion binding
EaE	0070069	cellular_component	cytochrome complex
EaE	0070469	cellular_component	respirasome
EaE	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
FaF	0005515	molecular_function	protein binding
FaF	0005739	cellular_component	mitochondrion
FaF	0005758	cellular_component	mitochondrial intermembrane space
FaF	0005829	cellular_component	cytosol
FaF	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
FaF	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
FaF	0006915	biological_process	apoptotic process
FaF	0008289	molecular_function	lipid binding
FaF	0009055	molecular_function	electron transfer activity
FaF	0018063	biological_process	cytochrome c-heme linkage
FaF	0020037	molecular_function	heme binding
FaF	0042802	molecular_function	identical protein binding
FaF	0043065	biological_process	positive regulation of apoptotic process
FaF	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
FaF	0046872	molecular_function	metal ion binding
FaF	0070069	cellular_component	cytochrome complex
FaF	0070469	cellular_component	respirasome
FaF	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
GaG	0005515	molecular_function	protein binding
GaG	0005739	cellular_component	mitochondrion
GaG	0005758	cellular_component	mitochondrial intermembrane space
GaG	0005829	cellular_component	cytosol
GaG	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
GaG	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
GaG	0006915	biological_process	apoptotic process
GaG	0008289	molecular_function	lipid binding
GaG	0009055	molecular_function	electron transfer activity
GaG	0018063	biological_process	cytochrome c-heme linkage
GaG	0020037	molecular_function	heme binding
GaG	0042802	molecular_function	identical protein binding
GaG	0043065	biological_process	positive regulation of apoptotic process
GaG	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GaG	0046872	molecular_function	metal ion binding
GaG	0070069	cellular_component	cytochrome complex
GaG	0070469	cellular_component	respirasome
GaG	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity
HaH	0005515	molecular_function	protein binding
HaH	0005739	cellular_component	mitochondrion
HaH	0005758	cellular_component	mitochondrial intermembrane space
HaH	0005829	cellular_component	cytosol
HaH	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
HaH	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
HaH	0006915	biological_process	apoptotic process
HaH	0008289	molecular_function	lipid binding
HaH	0009055	molecular_function	electron transfer activity
HaH	0018063	biological_process	cytochrome c-heme linkage
HaH	0020037	molecular_function	heme binding
HaH	0042802	molecular_function	identical protein binding
HaH	0043065	biological_process	positive regulation of apoptotic process
HaH	0043280	biological_process	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
HaH	0046872	molecular_function	metal ion binding
HaH	0070069	cellular_component	cytochrome complex
HaH	0070469	cellular_component	respirasome
HaH	2001056	biological_process	positive regulation of cysteine-type endopeptidase activity

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	16
Details	BINDING: covalent

Chain	Residue	Details
AaA	CYS14
EaE	CYS17
FaF	CYS14
FaF	CYS17
GaG	CYS14
GaG	CYS17
HaH	CYS14
HaH	CYS17
AaA	CYS17
BaB	CYS14
BaB	CYS17
CaC	CYS14
CaC	CYS17
DaD	CYS14
DaD	CYS17
EaE	CYS14

site_id	SWS_FT_FI2
Number of Residues	8
Details	BINDING: axial binding residue => ECO:0000255\|PROSITE-ProRule:PRU00433, ECO:0000269\|PubMed:5545094

Chain	Residue	Details
AaA	HIS18
BaB	HIS18
CaC	HIS18
DaD	HIS18
EaE	HIS18
FaF	HIS18
GaG	HIS18
HaH	HIS18

site_id	SWS_FT_FI3
Number of Residues	8
Details	BINDING: axial binding residue

Chain	Residue	Details
AaA	MET80
BaB	MET80
CaC	MET80
DaD	MET80
EaE	MET80
FaF	MET80
GaG	MET80
HaH	MET80

site_id	SWS_FT_FI4
Number of Residues	8
Details	MOD_RES: N-acetylglycine => ECO:0000269\|PubMed:14469771

Chain	Residue	Details
AaA	GLY1
BaB	GLY1
CaC	GLY1
DaD	GLY1
EaE	GLY1
FaF	GLY1
GaG	GLY1
HaH	GLY1

site_id	SWS_FT_FI5
Number of Residues	16
Details	MOD_RES: Phosphotyrosine => ECO:0000250\|UniProtKB:P62894

Chain	Residue	Details
AaA	TYR48
EaE	TYR97
FaF	TYR48
FaF	TYR97
GaG	TYR48
GaG	TYR97
HaH	TYR48
HaH	TYR97
AaA	TYR97
BaB	TYR48
BaB	TYR97
CaC	TYR48
CaC	TYR97
DaD	TYR48
DaD	TYR97
EaE	TYR48

site_id	SWS_FT_FI6
Number of Residues	8
Details	MOD_RES: N6-succinyllysine => ECO:0000250\|UniProtKB:P62897

Chain	Residue	Details
AaA	LYS55
BaB	LYS55
CaC	LYS55
DaD	LYS55
EaE	LYS55
FaF	LYS55
GaG	LYS55
HaH	LYS55

site_id	SWS_FT_FI7
Number of Residues	8
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000250\|UniProtKB:P62897

Chain	Residue	Details
AaA	LYS72
BaB	LYS72
CaC	LYS72
DaD	LYS72
EaE	LYS72
FaF	LYS72
GaG	LYS72
HaH	LYS72

site_id	SWS_FT_FI8
Number of Residues	8
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P62897

Chain	Residue	Details
AaA	LYS99
BaB	LYS99
CaC	LYS99
DaD	LYS99
EaE	LYS99
FaF	LYS99
GaG	LYS99
HaH	LYS99

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)