6SUR

The Rab33B-Atg16L1 crystal structure

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003924	molecular_function	GTPase activity
A	0005525	molecular_function	GTP binding
A	0032482	biological_process	Rab protein signal transduction
B	0003924	molecular_function	GTPase activity
B	0005525	molecular_function	GTP binding
B	0032482	biological_process	Rab protein signal transduction
C	0003924	molecular_function	GTPase activity
C	0005525	molecular_function	GTP binding
C	0032482	biological_process	Rab protein signal transduction
D	0003924	molecular_function	GTPase activity
D	0005525	molecular_function	GTP binding
D	0032482	biological_process	Rab protein signal transduction
E	0003924	molecular_function	GTPase activity
E	0005525	molecular_function	GTP binding
E	0032482	biological_process	Rab protein signal transduction
F	0003924	molecular_function	GTPase activity
F	0005525	molecular_function	GTP binding
F	0032482	biological_process	Rab protein signal transduction
I	0000045	biological_process	autophagosome assembly
J	0000045	biological_process	autophagosome assembly
K	0000045	biological_process	autophagosome assembly
L	0000045	biological_process	autophagosome assembly
M	0000045	biological_process	autophagosome assembly
N	0000045	biological_process	autophagosome assembly

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue MG A 300

Chain	Residue
A	THR47
A	THR65
A	ASP88
A	GTP301

---

site_id	AC2
Number of Residues	17
Details	binding site for residue GTP A 301

Chain	Residue
A	CYS48
A	THR62
A	THR65
A	GLY91
A	ASN148
A	LYS149
A	ASP151
A	LEU152
A	SER178
A	ALA179
A	LYS180
A	MG300
A	SER42
A	ASN43
A	GLY45
A	LYS46
A	THR47

---

site_id	AC3
Number of Residues	4
Details	binding site for residue MG B 300

Chain	Residue
B	THR47
B	THR65
B	ASP88
B	GTP301

---

site_id	AC4
Number of Residues	19
Details	binding site for residue GTP B 301

Chain	Residue
B	SER42
B	ASN43
B	VAL44
B	GLY45
B	LYS46
B	THR47
B	CYS48
B	PHE58
B	THR62
B	THR65
B	GLY91
B	ASN148
B	LYS149
B	ASP151
B	LEU152
B	SER178
B	ALA179
B	LYS180
B	MG300

---

site_id	AC5
Number of Residues	4
Details	binding site for residue MG C 300

Chain	Residue
C	THR47
C	THR65
C	ASP88
C	GTP301

---

site_id	AC6
Number of Residues	18
Details	binding site for residue GTP C 301

Chain	Residue
C	SER42
C	ASN43
C	GLY45
C	LYS46
C	THR47
C	CYS48
C	PHE58
C	THR62
C	THR65
C	GLY91
C	ASN148
C	LYS149
C	ASP151
C	LEU152
C	SER178
C	ALA179
C	LYS180
C	MG300

---

site_id	AC7
Number of Residues	4
Details	binding site for residue MG D 300

Chain	Residue
D	THR47
D	THR65
D	ASP88
D	GTP301

---

site_id	AC8
Number of Residues	18
Details	binding site for residue GTP D 301

Chain	Residue
D	SER42
D	ASN43
D	GLY45
D	LYS46
D	THR47
D	CYS48
D	PHE58
D	THR62
D	THR65
D	GLY91
D	ASN148
D	LYS149
D	ASP151
D	LEU152
D	SER178
D	ALA179
D	LYS180
D	MG300

---

site_id	AC9
Number of Residues	4
Details	binding site for residue MG E 300

Chain	Residue
E	THR47
E	THR65
E	ASP88
E	GTP301

---

site_id	AD1
Number of Residues	18
Details	binding site for residue GTP E 301

Chain	Residue
E	PHE58
E	THR62
E	THR65
E	GLY91
E	ASN148
E	LYS149
E	ASP151
E	SER178
E	ALA179
E	LYS180
E	MG300
E	SER42
E	ASN43
E	VAL44
E	GLY45
E	LYS46
E	THR47
E	CYS48

---

site_id	AD2
Number of Residues	4
Details	binding site for residue MG F 300

Chain	Residue
F	THR47
F	THR65
F	ASP88
F	GTP301

---

site_id	AD3
Number of Residues	19
Details	binding site for residue GTP F 301

Chain	Residue
F	SER42
F	ASN43
F	GLY45
F	LYS46
F	THR47
F	CYS48
F	PHE58
F	THR62
F	GLU63
F	THR65
F	GLY91
F	ASN148
F	LYS149
F	ASP151
F	LEU152
F	SER178
F	ALA179
F	LYS180
F	MG300

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	24
Details	BINDING:

Chain	Residue	Details
A	ILE39
C	ASP88
C	ASN148
C	SER178
D	ILE39
D	ASP88
D	ASN148
D	SER178
E	ILE39
E	ASP88
E	ASN148
A	ASP88
E	SER178
F	ILE39
F	ASP88
F	ASN148
F	SER178
A	ASN148
A	SER178
B	ILE39
B	ASP88
B	ASN148
B	SER178
C	ILE39

---