Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SQ2

Structure of a phosphomimetic switch 2 variant of Rab8a in complex with the phospho-Rab binding domain of RILPL2

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
D0046983molecular_functionprotein dimerization activity
E0046983molecular_functionprotein dimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue GTP A 900
ChainResidue
ASER17
APHE37
ASER39
ATHR40
AGLY66
AASN121
ALYS122
AASP124
ASER151
AALA152
ALYS153
AGLY18
AMG901
AHOH1003
AHOH1022
AHOH1044
AHOH1052
AHOH1074
AHOH1101
AVAL19
AGLY20
ALYS21
ATHR22
ACYS23
APHE33
ASER35

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 901
ChainResidue
ATHR22
ATHR40
AGTP900
AHOH1022
AHOH1052

site_idAC3
Number of Residues29
Detailsbinding site for residue GTP B 900
ChainResidue
BSER17
BGLY18
BVAL19
BGLY20
BLYS21
BTHR22
BCYS23
BPHE33
BASN34
BSER35
BPHE37
BSER39
BTHR40
BGLY66
BASN121
BLYS122
BASP124
BVAL125
BSER151
BALA152
BLYS153
BMG901
BHOH1017
BHOH1047
BHOH1050
BHOH1064
BHOH1120
BHOH1126
BHOH1132

site_idAC4
Number of Residues5
Detailsbinding site for residue MG B 901
ChainResidue
BTHR22
BTHR40
BGTP900
BHOH1017
BHOH1047

Functional Information from PROSITE/UniProt
site_idPS00675
Number of Residues14
DetailsSIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. LLLiGDSGVGKtcV
ChainResidueDetails
ALEU11-VAL24

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:27552051, ECO:0007744|PDB:5SZI
ChainResidueDetails
ASER17
AASN34
AASN121
BSER17
BASN34
BASN121

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9H0U4, ECO:0000269|PubMed:27552051, ECO:0007744|PDB:5SZI
ChainResidueDetails
BASP63
BALA152
AASP63
AALA152

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphothreonine; by LRRK2 => ECO:0000269|PubMed:26824392, ECO:0000269|PubMed:29125462, ECO:0000269|PubMed:30398148
ChainResidueDetails
AGLU72
BGLU72

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231
ChainResidueDetails
ASER181
BSER181

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon