6SNI

Cryo-EM structure of nanodisc reconstituted yeast ALG6 in complex with 6AG9 Fab

Functional Information from GO Data

Chain	GOid	namespace	contents
X	0005783	cellular_component	endoplasmic reticulum
X	0005789	cellular_component	endoplasmic reticulum membrane
X	0006486	biological_process	obsolete protein glycosylation
X	0006488	biological_process	dolichol-linked oligosaccharide biosynthetic process
X	0009060	biological_process	aerobic respiration
X	0009101	biological_process	glycoprotein biosynthetic process
X	0016740	molecular_function	transferase activity
X	0016757	molecular_function	glycosyltransferase activity
X	0016758	molecular_function	hexosyltransferase activity
X	0042281	molecular_function	dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue PTY X 1601

Chain	Residue
X	VAL478
X	TRP479
X	ILE524
X	LEU527

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site_id	AC2
Number of Residues	2
Details	binding site for residue PTY X 1602

Chain	Residue
X	VAL477
X	SER481

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site_id	AC3
Number of Residues	1
Details	binding site for residue PTY X 1603

Chain	Residue
X	SER481

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site_id	AC4
Number of Residues	6
Details	binding site for residue PTY X 1605

Chain	Residue
X	TYR209
X	ASN212
X	ASN213
X	ASP216
X	PHE153
X	TYR160

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site_id	AC5
Number of Residues	4
Details	binding site for residue Y01 X 1606

Chain	Residue
H	Y012202
X	PRO241
X	THR339
X	SER374

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site_id	AC6
Number of Residues	4
Details	binding site for residue Y01 H 2201

Chain	Residue
H	ASN28
H	TYR30
X	ILE230
X	PHE277

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site_id	AC7
Number of Residues	6
Details	binding site for residue Y01 H 2202

Chain	Residue
H	TRP102
H	TYR103
X	ALA301
X	GLN332
X	Y011606
X	HOH1702

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Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH

Chain	Residue	Details
H	TYR203-HIS209
L	TYR194-HIS200

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	184
Details	Topological domain: {"description":"Lumenal","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	180
Details	Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI3
Number of Residues	49
Details	Topological domain: {"description":"Cytoplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

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