Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6SEV

Structure of Dps from Listeria innocua soaked with 10 mM zinc for 120 minutes

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005737	cellular_component	cytoplasm
A	0006879	biological_process	intracellular iron ion homeostasis
A	0008199	molecular_function	ferric iron binding
A	0016491	molecular_function	oxidoreductase activity
A	0016722	molecular_function	oxidoreductase activity, acting on metal ions
A	0046872	molecular_function	metal ion binding
B	0005737	cellular_component	cytoplasm
B	0006879	biological_process	intracellular iron ion homeostasis
B	0008199	molecular_function	ferric iron binding
B	0016491	molecular_function	oxidoreductase activity
B	0016722	molecular_function	oxidoreductase activity, acting on metal ions
B	0046872	molecular_function	metal ion binding
C	0005737	cellular_component	cytoplasm
C	0006879	biological_process	intracellular iron ion homeostasis
C	0008199	molecular_function	ferric iron binding
C	0016491	molecular_function	oxidoreductase activity
C	0016722	molecular_function	oxidoreductase activity, acting on metal ions
C	0046872	molecular_function	metal ion binding
D	0005737	cellular_component	cytoplasm
D	0006879	biological_process	intracellular iron ion homeostasis
D	0008199	molecular_function	ferric iron binding
D	0016491	molecular_function	oxidoreductase activity
D	0016722	molecular_function	oxidoreductase activity, acting on metal ions
D	0046872	molecular_function	metal ion binding
E	0005737	cellular_component	cytoplasm
E	0006879	biological_process	intracellular iron ion homeostasis
E	0008199	molecular_function	ferric iron binding
E	0016491	molecular_function	oxidoreductase activity
E	0016722	molecular_function	oxidoreductase activity, acting on metal ions
E	0046872	molecular_function	metal ion binding
F	0005737	cellular_component	cytoplasm
F	0006879	biological_process	intracellular iron ion homeostasis
F	0008199	molecular_function	ferric iron binding
F	0016491	molecular_function	oxidoreductase activity
F	0016722	molecular_function	oxidoreductase activity, acting on metal ions
F	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue ZN A 201

Chain	Residue
A	ASP59
A	GLU63
A	ZN202
A	ZN203
D	HIS32

site_id	AC2
Number of Residues	3
Details	binding site for residue ZN A 202

Chain	Residue
A	GLU63
A	ZN201
D	HIS44

site_id	AC3
Number of Residues	4
Details	binding site for residue ZN A 203

Chain	Residue
A	ZN201
D	HIS29
D	ASP48
A	ASP59

site_id	AC4
Number of Residues	3
Details	binding site for residue ZN A 205

Chain	Residue
A	ASP131
B	ASP131
F	ASP131

site_id	AC5
Number of Residues	3
Details	binding site for residue ZN A 206

Chain	Residue
A	ASP131
B	ASP131
F	ASP131

site_id	AC6
Number of Residues	4
Details	binding site for residue ZN B 201

Chain	Residue
B	GLU63
B	ZN202
E	HIS44
E	HOH310

site_id	AC7
Number of Residues	5
Details	binding site for residue ZN B 202

Chain	Residue
B	ASP59
B	GLU63
B	ZN201
E	HIS32
E	HOH310

site_id	AC8
Number of Residues	4
Details	binding site for residue ZN B 203

Chain	Residue
B	HIS38
C	ASN39
C	ZN202
F	GLU124

site_id	AC9
Number of Residues	4
Details	binding site for residue ZN B 204

Chain	Residue
B	HIS32
B	HIS44
E	GLU63
E	ZN201

site_id	AD1
Number of Residues	4
Details	binding site for residue ZN C 201

Chain	Residue
C	HIS32
C	ASP59
C	GLU63
C	ZN204

site_id	AD2
Number of Residues	4
Details	binding site for residue ZN C 202

Chain	Residue
B	ZN203
C	HIS38
D	ZN203
F	GLU124

site_id	AD3
Number of Residues	4
Details	binding site for residue ZN C 203

Chain	Residue
C	ASP131
D	ASP131
E	ASP131
E	HOH324

site_id	AD4
Number of Residues	3
Details	binding site for residue ZN C 204

Chain	Residue
C	HIS44
C	GLU63
C	ZN201

site_id	AD5
Number of Residues	4
Details	binding site for residue ZN D 201

Chain	Residue
A	HIS32
D	ASP59
D	GLU63
D	ZN202

site_id	AD6
Number of Residues	3
Details	binding site for residue ZN D 202

Chain	Residue
A	HIS44
D	GLU63
D	ZN201

site_id	AD7
Number of Residues	4
Details	binding site for residue ZN D 203

Chain	Residue
C	ZN202
D	HIS38
F	VAL8
F	GLU124

site_id	AD8
Number of Residues	4
Details	binding site for residue ZN E 201

Chain	Residue
B	HIS32
B	ZN204
E	ASP59
E	GLU63

site_id	AD9
Number of Residues	3
Details	binding site for residue ZN E 202

Chain	Residue
C	ASP131
D	ASP131
E	ASP131

site_id	AE1
Number of Residues	4
Details	binding site for residue ZN F 201

Chain	Residue
F	HIS32
F	ASP59
F	GLU63
F	ZN202

site_id	AE2
Number of Residues	3
Details	binding site for residue ZN F 202

Chain	Residue
F	HIS44
F	GLU63
F	ZN201

Functional Information from PROSITE/UniProt

site_id	PS00818
Number of Residues	17
Details	DPS_1 Dps protein family signature 1. HWyMrGhnfftLHekmD

Chain	Residue	Details
A	HIS32-ASP48

site_id	PS00819
Number of Residues	15
Details	DPS_2 Dps protein family signature 2. MDeVAERllaIGgsP

Chain	Residue	Details
A	MET58-PRO72

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	BINDING: BINDING => ECO:0000269\|PubMed:10625425

Chain	Residue	Details
A	HIS32
B	HIS32
C	HIS32
D	HIS32
E	HIS32
F	HIS32

site_id	SWS_FT_FI2
Number of Residues	6
Details	BINDING: in other chain => ECO:0000269\|PubMed:10625425

Chain	Residue	Details
A	ASP59
B	ASP59
C	ASP59
D	ASP59
E	ASP59
F	ASP59

site_id	SWS_FT_FI3
Number of Residues	6
Details	BINDING: BINDING => ECO:0000305\|PubMed:10625425

Chain	Residue	Details
A	GLU63
B	GLU63
C	GLU63
D	GLU63
E	GLU63
F	GLU63

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)