6SAW
Chromophore binding domain of bacteriophytochrome linked diguanylyl cyclase from Idiomarina species A28L (dimeric Pfr-like state).
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| F | 0006355 | biological_process | regulation of DNA-templated transcription |
| G | 0006355 | biological_process | regulation of DNA-templated transcription |
| H | 0006355 | biological_process | regulation of DNA-templated transcription |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | binding site for residue LBV A 401 |
| Chain | Residue |
| A | CYS17 |
| A | ARG214 |
| A | VAL248 |
| A | LEU251 |
| A | HIS252 |
| A | TYR255 |
| A | PHE259 |
| A | HIS282 |
| A | HOH501 |
| A | ASP18 |
| A | TYR168 |
| A | MET190 |
| A | HIS193 |
| A | PHE195 |
| A | ASP199 |
| A | ILE200 |
| A | PRO201 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue CL A 402 |
| Chain | Residue |
| A | ARG291 |
| A | ARG294 |
| A | ARG295 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue CL B 402 |
| Chain | Residue |
| B | ARG291 |
| B | ARG294 |
| B | ARG295 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue CL C 402 |
| Chain | Residue |
| C | ARG291 |
| C | ARG294 |
| C | ARG295 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue CL D 402 |
| Chain | Residue |
| D | ARG291 |
| D | ARG294 |
| D | ARG295 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue CL E 402 |
| Chain | Residue |
| E | ARG291 |
| E | ARG294 |
| E | ARG295 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue CL F 402 |
| Chain | Residue |
| F | ARG291 |
| F | ARG294 |
| F | ARG295 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue CL G 402 |
| Chain | Residue |
| G | ARG291 |
| G | ARG294 |
| G | ARG295 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue CL H 402 |
| Chain | Residue |
| H | ARG291 |
| H | ARG294 |
| H | ARG295 |
| site_id | AD1 |
| Number of Residues | 22 |
| Details | binding site for Di-peptide LBV B 401 and CYS B 17 |
| Chain | Residue |
| B | LEU13 |
| B | ILE14 |
| B | ALA15 |
| B | ALA16 |
| B | ASP18 |
| B | GLN19 |
| B | GLU20 |
| B | TYR168 |
| B | MET190 |
| B | HIS193 |
| B | PHE195 |
| B | ASP199 |
| B | ILE200 |
| B | PRO201 |
| B | ARG214 |
| B | LEU251 |
| B | HIS252 |
| B | TYR255 |
| B | PHE259 |
| B | SER266 |
| B | HIS282 |
| B | HOH501 |
| site_id | AD2 |
| Number of Residues | 23 |
| Details | binding site for Di-peptide LBV C 401 and CYS C 17 |
| Chain | Residue |
| A | THR188 |
| C | LEU13 |
| C | ILE14 |
| C | ALA15 |
| C | ALA16 |
| C | ASP18 |
| C | GLN19 |
| C | GLU20 |
| C | TYR168 |
| C | MET190 |
| C | HIS193 |
| C | PHE195 |
| C | ASP199 |
| C | ILE200 |
| C | PRO201 |
| C | ARG214 |
| C | VAL248 |
| C | LEU251 |
| C | HIS252 |
| C | TYR255 |
| C | PHE259 |
| C | HIS282 |
| C | HOH501 |
| site_id | AD3 |
| Number of Residues | 21 |
| Details | binding site for Di-peptide LBV D 401 and CYS D 17 |
| Chain | Residue |
| D | ARG214 |
| D | VAL248 |
| D | LEU251 |
| D | HIS252 |
| D | TYR255 |
| D | PHE259 |
| D | HIS282 |
| D | HOH501 |
| D | LEU13 |
| D | ILE14 |
| D | ALA15 |
| D | ALA16 |
| D | ASP18 |
| D | GLN19 |
| D | GLU20 |
| D | TYR168 |
| D | HIS193 |
| D | PHE195 |
| D | ASP199 |
| D | ILE200 |
| D | PRO201 |
| site_id | AD4 |
| Number of Residues | 22 |
| Details | binding site for Di-peptide LBV E 401 and CYS E 17 |
| Chain | Residue |
| E | LEU13 |
| E | ILE14 |
| E | ALA15 |
| E | ALA16 |
| E | ASP18 |
| E | GLN19 |
| E | GLU20 |
| E | TYR168 |
| E | HIS193 |
| E | PHE195 |
| E | ASP199 |
| E | ILE200 |
| E | PRO201 |
| E | ARG214 |
| E | ARG246 |
| E | VAL248 |
| E | LEU251 |
| E | HIS252 |
| E | TYR255 |
| E | PHE259 |
| E | HIS282 |
| E | HOH501 |
| site_id | AD5 |
| Number of Residues | 21 |
| Details | binding site for Di-peptide LBV F 401 and CYS F 17 |
| Chain | Residue |
| F | LEU13 |
| F | ALA15 |
| F | ALA16 |
| F | ASP18 |
| F | GLN19 |
| F | GLU20 |
| F | TYR168 |
| F | MET190 |
| F | HIS193 |
| F | PHE195 |
| F | ASP199 |
| F | ILE200 |
| F | PRO201 |
| F | ARG214 |
| F | LEU251 |
| F | HIS252 |
| F | TYR255 |
| F | PHE259 |
| F | HIS282 |
| F | HOH501 |
| H | LEU186 |
| site_id | AD6 |
| Number of Residues | 22 |
| Details | binding site for Di-peptide LBV G 401 and CYS G 17 |
| Chain | Residue |
| G | LEU13 |
| G | ILE14 |
| G | ALA15 |
| G | ALA16 |
| G | ASP18 |
| G | GLN19 |
| G | GLU20 |
| G | TYR168 |
| G | MET190 |
| G | HIS193 |
| G | PHE195 |
| G | ASP199 |
| G | ILE200 |
| G | PRO201 |
| G | ARG214 |
| G | LEU251 |
| G | HIS252 |
| G | TYR255 |
| G | PHE259 |
| G | SER266 |
| G | HIS282 |
| G | HOH501 |
| site_id | AD7 |
| Number of Residues | 22 |
| Details | binding site for Di-peptide LBV H 401 and CYS H 17 |
| Chain | Residue |
| H | LEU13 |
| H | ILE14 |
| H | ALA15 |
| H | ALA16 |
| H | ASP18 |
| H | GLN19 |
| H | GLU20 |
| H | TYR168 |
| H | HIS193 |
| H | PHE195 |
| H | ASP199 |
| H | ILE200 |
| H | PRO201 |
| H | TYR208 |
| H | ARG214 |
| H | VAL248 |
| H | LEU251 |
| H | HIS252 |
| H | TYR255 |
| H | PHE259 |
| H | HIS282 |
| H | HOH501 |
