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6S8H

Cryo-EM structure of LptB2FG in complex with LPS

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005886cellular_componentplasma membrane
A0016887molecular_functionATP hydrolysis activity
A0043190cellular_componentATP-binding cassette (ABC) transporter complex
A0055085biological_processtransmembrane transport
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005886cellular_componentplasma membrane
B0016887molecular_functionATP hydrolysis activity
B0043190cellular_componentATP-binding cassette (ABC) transporter complex
B0055085biological_processtransmembrane transport
F0005886cellular_componentplasma membrane
F0015920biological_processlipopolysaccharide transport
F0016020cellular_componentmembrane
F0043190cellular_componentATP-binding cassette (ABC) transporter complex
F0055085biological_processtransmembrane transport
G0005886cellular_componentplasma membrane
G0015920biological_processlipopolysaccharide transport
G0016020cellular_componentmembrane
G0043190cellular_componentATP-binding cassette (ABC) transporter complex
G0055085biological_processtransmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue LMN F 401
ChainResidue
FARG292
FGLN293
GARG86
GLMN401

site_idAC2
Number of Residues18
Detailsbinding site for residue JSG F 402
ChainResidue
FARG263
FTHR314
GSER30
GILE33
GLYS34
GASP37
GLYS41
GMET70
GARG133
GILE313
GGLY316
GGLN324
GLMN401
FILE25
FPHE26
FGLN29
FLEU62
FGLN248

site_idAC3
Number of Residues21
Detailsbinding site for Poly-Saccharide residues MET F 74 through LMT F 404
ChainResidue
FILE21
FLEU70
FGLY71
FLEU72
FLEU73
FTHR75
FLEU76
FLYS78
FARG295
GTHR22
GMET70
GALA72
GLEU73
GGLY75
GALA76
GLEU77
GLEU78
GGLY306
GVAL307
GPHE317
GLMN401

site_idAC4
Number of Residues3
Detailsbinding site for Poly-Saccharide residues ARG G 301 through LMT G 402
ChainResidue
GLEU300
GSER302
GVAL303

site_idAC5
Number of Residues17
Detailsbinding site for Di-peptide LMN G 401 and LEU G 74
ChainResidue
FLEU297
FLMN401
FJSG402
GTHR18
GMET21
GTHR22
GMET70
GALA72
GLEU73
GGLY75
GALA76
GLEU77
GLEU78
GMET82
GVAL309
GGLY312
GILE313

Functional Information from PROSITE/UniProt
site_idPS00211
Number of Residues15
DetailsABC_TRANSPORTER_1 ABC transporters family signature. LSGGERRRVEIARAL
ChainResidueDetails
ALEU138-LEU152

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00434
ChainResidueDetails
AGLY36
BGLY36
FPRO291-ARG295
FASP349-VAL366

site_idSWS_FT_FI2
Number of Residues120
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
FLEU16-GLY36
FLEU54-MET74
FALA101-GLY121
FILE270-ASN290
FVAL296-LEU316
FTHR328-TRP348

site_idSWS_FT_FI3
Number of Residues173
DetailsTOPO_DOM: Periplasmic => ECO:0000255
ChainResidueDetails
FALA37-GLY53
FPRO122-ARG269
FLYS317-PRO327

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PDB entries from 2024-07-17

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