6RT5
The YTH domain of YTHDC1 protein in complex with Gm6AC oligonucleotide
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 601 |
| Chain | Residue |
| B | GLY344 |
| B | SER346 |
| B | LYS347 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 C 601 |
| Chain | Residue |
| C | ARG451 |
| C | GLU452 |
| C | HOH715 |
| C | HOH725 |
| C | HOH732 |
| C | HOH753 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 C 602 |
| Chain | Residue |
| B | GLN478 |
| B | GLU479 |
| C | GLY344 |
| C | LYS347 |
| C | HOH703 |
| C | HOH746 |
| C | HOH766 |
| site_id | AC4 |
| Number of Residues | 14 |
| Details | binding site for Di-nucleotide 6MZ E 1 and C E 2 |
| Chain | Residue |
| B | LYS361 |
| B | SER362 |
| B | ASN363 |
| B | ASN367 |
| B | TRP377 |
| B | SER378 |
| B | ARG404 |
| B | TRP428 |
| B | ILE473 |
| B | GLY474 |
| B | ARG475 |
| B | ASP476 |
| B | HOH726 |
| E | HOH101 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31670957","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6RT4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT7","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"25242552","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31670957","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6RT4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6RT7","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"25242552","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
