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6RB7

Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008747molecular_functionN-acetylneuraminate lyase activity
A0016829molecular_functionlyase activity
A0019262biological_processN-acetylneuraminate catabolic process
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008747molecular_functionN-acetylneuraminate lyase activity
B0016829molecular_functionlyase activity
B0019262biological_processN-acetylneuraminate catabolic process
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0008747molecular_functionN-acetylneuraminate lyase activity
E0016829molecular_functionlyase activity
E0019262biological_processN-acetylneuraminate catabolic process
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0008747molecular_functionN-acetylneuraminate lyase activity
F0016829molecular_functionlyase activity
F0019262biological_processN-acetylneuraminate catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue TRS A 401
ChainResidue
AASP194
AGLU195
AGLY211
AMET256
ATYR257
AHOH517
AHOH661

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 402
ChainResidue
AHOH517
AHOH745
AHOH779
BHOH836
AASN255
AHOH515

site_idAC3
Number of Residues4
Detailsbinding site for residue PEG A 403
ChainResidue
AARG236
ATYR240
AHOH502
EGLU206

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 404
ChainResidue
AGLU66
AMET69
AHOH556
AHOH718

site_idAC5
Number of Residues4
Detailsbinding site for residue BCN A 405
ChainResidue
AALA229
AGLY230
AHOH706
EGLY230

site_idAC6
Number of Residues12
Detailsbinding site for residue GOL A 406
ChainResidue
AHIS114
APRO142
AGLN143
AGLY146
AHOH503
AHOH519
AHOH752
BHIS114
BGLN143
BGLY146
BHOH544
BHOH708

site_idAC7
Number of Residues5
Detailsbinding site for residue MG A 407
ChainResidue
AASN255
APRO280
AHOH677
BPRO116
BHOH769

site_idAC8
Number of Residues7
Detailsbinding site for residue TRS B 401
ChainResidue
BASP194
BGLU195
BGLY211
BTHR212
BMET256
BTYR257
BHOH675

site_idAC9
Number of Residues4
Detailsbinding site for residue GOL B 402
ChainResidue
AHOH766
BASN255
BHOH549
BHOH730

site_idAD1
Number of Residues5
Detailsbinding site for residue MG B 403
ChainResidue
APRO116
AHOH768
BASN255
BPRO280
BHOH701

site_idAD2
Number of Residues9
Detailsbinding site for residue TRS E 401
ChainResidue
EASP194
EGLU195
EGLY211
ETHR212
EMET256
ETYR257
EHOH516
EHOH638
EHOH829

site_idAD3
Number of Residues4
Detailsbinding site for residue GOL E 402
ChainResidue
EASN255
EHOH516
EHOH726
EHOH736

site_idAD4
Number of Residues5
Detailsbinding site for residue MG E 403
ChainResidue
EASN255
EPRO280
EHOH693
EHOH736
FPRO116

site_idAD5
Number of Residues6
Detailsbinding site for residue TRS F 401
ChainResidue
FASP194
FGLU195
FGLY211
FMET256
FTYR257
FHOH676

site_idAD6
Number of Residues5
Detailsbinding site for residue GOL F 402
ChainResidue
EPHE113
FASN255
FTYR257
FHOH516
FHOH732

site_idAD7
Number of Residues3
Detailsbinding site for residue PEG F 403
ChainResidue
FGLY74
FLYS75
FHOH742

site_idAD8
Number of Residues3
Detailsbinding site for residue PEG F 404
ChainResidue
FARG236
FHOH513
FHOH601

site_idAD9
Number of Residues5
Detailsbinding site for residue MG F 405
ChainResidue
EPRO116
EHOH764
FASN255
FPRO280
FHOH647

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_01237
ChainResidueDetails
ATYR139
BTYR139
ETYR139
FTYR139

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Schiff-base intermediate with substrate => ECO:0000255|HAMAP-Rule:MF_01237
ChainResidueDetails
AALA167
BALA167
EALA167
FALA167

site_idSWS_FT_FI3
Number of Residues28
DetailsBINDING: BINDING => ECO:0000269|PubMed:31636419, ECO:0007744|PDB:6RD1
ChainResidueDetails
ASER49
BSER169
BGLY192
BASP194
BGLU195
BGLY211
ESER49
ESER50
ESER169
EGLY192
EASP194
ASER50
EGLU195
EGLY211
FSER49
FSER50
FSER169
FGLY192
FASP194
FGLU195
FGLY211
ASER169
AGLY192
AASP194
AGLU195
AGLY211
BSER49
BSER50

227344

PDB entries from 2024-11-13

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