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6RA9

Novel structural features and post-translational modifications in eukaryotic elongation factor 1A2 from Oryctolagus cuniculus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0005789cellular_componentendoplasmic reticulum membrane
A0005853cellular_componenteukaryotic translation elongation factor 1 complex
A0006412biological_processtranslation
A0006414biological_processtranslational elongation
A0016787molecular_functionhydrolase activity
B0000166molecular_functionnucleotide binding
B0003746molecular_functiontranslation elongation factor activity
B0003924molecular_functionGTPase activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005789cellular_componentendoplasmic reticulum membrane
B0005853cellular_componenteukaryotic translation elongation factor 1 complex
B0006412biological_processtranslation
B0006414biological_processtranslational elongation
B0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue GPE A 501
ChainResidue
AALA373
AGLU374

site_idAC2
Number of Residues3
Detailsbinding site for residue GPE A 502
ChainResidue
ATHR242
AGLU301
ALEU303

site_idAC3
Number of Residues21
Detailsbinding site for residue GDP A 503
ChainResidue
ALYS20
ASER21
ATHR22
ASER53
AASN153
ALYS154
AASP156
ASER157
ASER194
AGLY195
ATRP196
AHOH612
AHOH613
AHOH621
BGLU203
BPRO204
BHOH619
AHIS15
AASP17
ASER18
AGLY19

site_idAC4
Number of Residues5
Detailsbinding site for residue GOL A 504
ChainResidue
AHIS349
AGLY351
ALYS395
ASER396
BGLU48

site_idAC5
Number of Residues1
Detailsbinding site for residue GOL A 505
ChainResidue
ASER316

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 A 506
ChainResidue
AASP380
AARG381
AARG382

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 507
ChainResidue
AHIS15
AGLN132
ASO4510

site_idAC8
Number of Residues3
Detailsbinding site for residue SO4 A 508
ChainResidue
AARG69
AARG381
BARG69

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 A 509
ChainResidue
APRO160
ASER163
AGLU164
ALYS165

site_idAD1
Number of Residues6
Detailsbinding site for residue SO4 A 510
ChainResidue
AHIS15
AILE127
ASER128
AGLN132
ATHR133
ASO4507

site_idAD2
Number of Residues2
Detailsbinding site for residue GPE B 501
ChainResidue
BALA373
BGLU374

site_idAD3
Number of Residues15
Detailsbinding site for residue GDP B 502
ChainResidue
BASP17
BSER18
BGLY19
BLYS20
BSER21
BTHR22
BASN153
BLYS154
BASP156
BSER194
BGLY195
BTRP196
BLYS385
BGOL503
BHOH624

site_idAD4
Number of Residues5
Detailsbinding site for residue GOL B 503
ChainResidue
BTRP196
BHIS197
BLYS385
BLEU387
BGDP502

site_idAD5
Number of Residues6
Detailsbinding site for residue GOL B 504
ChainResidue
BGLN147
BLEU148
BILE149
BTHR187
BARG218
BTHR234

site_idAD6
Number of Residues7
Detailsbinding site for residue GOL B 505
ChainResidue
BTYR167
BPRO185
BVAL188
BPRO189
BPHE190
BTRP214
BLYS215

site_idAD7
Number of Residues5
Detailsbinding site for residue GOL B 506
ChainResidue
AVAL253
ATYR254
ALYS255
BASP35
BLYS36

site_idAD8
Number of Residues2
Detailsbinding site for residue SO4 B 507
ChainResidue
BARG381
BHOH631

site_idAD9
Number of Residues4
Detailsbinding site for residue SO4 B 508
ChainResidue
ALEU347
AASN348
BARG69
BARG96

site_idAE1
Number of Residues2
Detailsbinding site for residue SO4 B 509
ChainResidue
BLYS129
BARG134

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 510
ChainResidue
BPRO160
BSER163
BGLU164
BLYS165

site_idAE3
Number of Residues4
Detailsbinding site for residue SO4 B 511
ChainResidue
BTYR141
BLYS146
BSER416
BGLN417

site_idAE4
Number of Residues3
Detailsbinding site for residue SO4 B 512
ChainResidue
BSER53
BARG381
BARG382

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DKlkaEReRGITIdiS
ChainResidueDetails
BASP61-SER76
AASP61-SER76

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues474
DetailsDomain: {"description":"tr-type G"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsRegion: {"description":"G1","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsRegion: {"description":"G2","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsRegion: {"description":"G3","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues6
DetailsRegion: {"description":"G4","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsRegion: {"description":"G5","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"25326326","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4C0S","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues4
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q05639","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues2
DetailsModified residue: {"description":"N6,N6-dimethyllysine","evidences":[{"source":"UniProtKB","id":"Q05639","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues2
DetailsModified residue: {"description":"N6,N6,N6-trimethyllysine","evidences":[{"source":"UniProtKB","id":"Q05639","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"25326326","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4C0S","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues4
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q05639","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P62632","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"25326326","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4C0S","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues4
DetailsModified residue: {"description":"5-glutamyl glycerylphosphorylethanolamine","evidences":[{"source":"PubMed","id":"9518480","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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