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6QUX

Crystal Structure of KRAS-G12D in Complex with Natural Product-Like Compound 15

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0007165biological_processsignal transduction
A0016020cellular_componentmembrane
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
B0007165biological_processsignal transduction
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue GCP A 201
ChainResidue
AASP12
AASP30
AGLU31
APRO34
ATHR35
AGLY60
AASN116
ALYS117
AASP119
ALEU120
ASER145
AGLY13
AALA146
AMG202
AHOH303
AHOH306
AHOH312
AHOH339
AHOH352
AHOH391
AVAL14
AGLY15
ALYS16
ASER17
AALA18
APHE28
AVAL29

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
ASER17
ATHR35
AGCP201
AHOH303
AHOH306

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO B 201
ChainResidue
APRO121
BGLU3
BLYS5
BHOH307

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO B 202
ChainResidue
ASER39
AARG41
BGLU37
BJJN205
BHOH345

site_idAC5
Number of Residues28
Detailsbinding site for residue GCP B 203
ChainResidue
BASP12
BGLY13
BVAL14
BGLY15
BLYS16
BSER17
BALA18
BPHE28
BVAL29
BASP30
BGLU31
BPRO34
BTHR35
BGLY60
BASN116
BLYS117
BASP119
BLEU120
BSER145
BALA146
BMG204
BHOH306
BHOH313
BHOH324
BHOH357
BHOH361
BHOH374
BHOH383

site_idAC6
Number of Residues5
Detailsbinding site for residue MG B 204
ChainResidue
BSER17
BTHR35
BGCP203
BHOH306
BHOH313

site_idAC7
Number of Residues7
Detailsbinding site for residue JJN B 205
ChainResidue
BLYS5
BLEU6
BVAL7
BASP54
BTHR74
BEDO202
BHOH362

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
ChainResidueDetails
AGLY10
AVAL29
AALA59
AASN116
BGLY10
BVAL29
BALA59
BASN116

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylmethionine; in GTPase KRas; alternate => ECO:0000269|Ref.17
ChainResidueDetails
AMET1
BMET1

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N-acetylthreonine; in GTPase KRas, N-terminally processed => ECO:0000269|Ref.17
ChainResidueDetails
ATHR2
BTHR2

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:22711838
ChainResidueDetails
ALYS104
BLYS104

site_idSWS_FT_FI5
Number of Residues2
DetailsCARBOHYD: (Microbial infection) O-linked (Glc) threonine; by P.sordellii toxin TcsL => ECO:0000269|PubMed:19744486
ChainResidueDetails
ATHR35
BTHR35

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PDB entries from 2024-05-01

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