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6QTV

Crystal structure of an Arabidopsis WD40 domain in complex with an atypical bHLH transcription factor

Functional Information from GO Data
ChainGOidnamespacecontents
A0061630molecular_functionubiquitin protein ligase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue MLI A 701
ChainResidue
APHE400
AGLU416
AARG453
ALYS653
AHOH808
AHOH892
AHOH933
AHOH1003

site_idAC2
Number of Residues11
Detailsbinding site for residue MLI A 702
ChainResidue
ALYS549
AARG573
ATHR585
AARG587
AHIS628
AARG629
AHOH826
AHOH872
AHOH882
AHOH914
AGLY547

site_idAC3
Number of Residues8
Detailsbinding site for residue MLI A 703
ChainResidue
AMET504
ALYS505
AHIS531
AARG623
AHOH816
AHOH824
AHOH831
AHOH853

site_idAC4
Number of Residues10
Detailsbinding site for residue GOL A 704
ChainResidue
ASER424
ACYS425
ATRP467
ACYS509
ACSO510
ASER553
APHE595
AHOH807
AHOH861
BGLN59

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 705
ChainResidue
AARG494
ATYR520
ATYR532
AVAL577
ALYS578
AHOH848

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LASAstDsTLRLWDV
ChainResidueDetails
ALEU563-VAL577

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues40
DetailsRepeat: {"description":"WD 2","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues40
DetailsRepeat: {"description":"WD 3","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues38
DetailsRepeat: {"description":"WD 5","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues39
DetailsRepeat: {"description":"WD 6","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsRegion: {"description":"Binding of human TRIB1 COP1-binding-motif","evidences":[{"source":"PubMed","id":"27041596","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsSite: {"description":"Human TRIB1 COP1-binding motif","evidences":[{"source":"PubMed","id":"27041596","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

251174

PDB entries from 2026-03-25

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