Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003909 | molecular_function | DNA ligase activity |
A | 0003910 | molecular_function | DNA ligase (ATP) activity |
A | 0005524 | molecular_function | ATP binding |
A | 0006281 | biological_process | DNA repair |
A | 0006310 | biological_process | DNA recombination |
A | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 2 |
Details | binding site for residue PEG A 1001 |
Chain | Residue |
A | LYS487 |
A | TRP495 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue ACT A 1002 |
Chain | Residue |
A | ARG409 |
A | ARG413 |
A | HOH1109 |
site_id | AC3 |
Number of Residues | 16 |
Details | binding site for residue AMP C 101 |
Chain | Residue |
A | ARG573 |
A | ARG589 |
A | GLU621 |
A | PHE660 |
A | MET723 |
A | LYS725 |
A | TRP742 |
A | LYS744 |
A | HOH1164 |
C | DG1 |
C | HOH201 |
C | HOH207 |
A | GLU566 |
A | TYR567 |
A | LYS568 |
A | TYR569 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue TRS D 101 |
Chain | Residue |
B | DG9 |
B | HOH108 |
D | DC18 |
D | DG19 |
D | HOH214 |
Functional Information from PROSITE/UniProt
site_id | PS00333 |
Number of Residues | 27 |
Details | DNA_LIGASE_A2 ATP-dependent DNA ligase signature 2. EGLMVKtldvdat.YEiakrs.Hnwl..KLK |
Chain | Residue | Details |
A | GLU720-LYS746 | |
site_id | PS00697 |
Number of Residues | 9 |
Details | DNA_LIGASE_A1 ATP-dependent DNA ligase AMP-binding site. EYKYDGQRA |
Chain | Residue | Details |
A | GLU566-ALA574 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 11 |
Details | Region: {"description":"Interaction with target DNA"} |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | Active site: {"description":"N6-AMP-lysine intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU10135","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"15565146","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1X9N","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]} |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | Site: {"description":"Interaction with target DNA"} |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |