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6PZR

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with Resminostat

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
B0000118cellular_componenthistone deacetylase complex
B0004407molecular_functionhistone deacetylase activity
B0006325biological_processchromatin organization
B0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 801
ChainResidue
AASP612
AHIS614
AASP705
AP7D804

site_idAC2
Number of Residues5
Detailsbinding site for residue K A 802
ChainResidue
AASP610
AASP612
AHIS614
ASER633
ALEU634

site_idAC3
Number of Residues5
Detailsbinding site for residue K A 803
ChainResidue
APHE623
AASP626
AVAL629
ATYR662
AHOH940

site_idAC4
Number of Residues12
Detailsbinding site for residue P7D A 804
ChainResidue
ASER531
AHIS573
AHIS574
APHE583
AASP612
AHIS614
AASN645
AASP705
AGLY743
ATYR745
AZN801
BASP627

site_idAC5
Number of Residues2
Detailsbinding site for residue EDO A 805
ChainResidue
AARG691
AHIS727

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO A 806
ChainResidue
ATYR448
AGLN450
AARG488

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO A 807
ChainResidue
AALA791
ATRP794
ASER795
ALEU797
BASN523

site_idAC8
Number of Residues1
Detailsbinding site for residue IOD A 811
ChainResidue
AARG520

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN B 801
ChainResidue
BASP612
BHIS614
BASP705
BP7D804

site_idAD1
Number of Residues5
Detailsbinding site for residue K B 802
ChainResidue
BASP610
BASP612
BHIS614
BSER633
BLEU634

site_idAD2
Number of Residues5
Detailsbinding site for residue K B 803
ChainResidue
BPHE623
BASP626
BVAL629
BTYR662
BHOH950

site_idAD3
Number of Residues11
Detailsbinding site for residue P7D B 804
ChainResidue
BSER531
BHIS573
BHIS574
BPHE583
BASP612
BHIS614
BPHE643
BASN645
BASP705
BTYR745
BZN801

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO B 805
ChainResidue
BGLU624
BASP652
BLYS653
BVAL654
BGLY655
BLEU656

site_idAD5
Number of Residues2
Detailsbinding site for residue EDO B 806
ChainResidue
BGLY709
BPHE715

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO B 807
ChainResidue
BTYR448
BASP449
BGLN450
BARG488

site_idAD7
Number of Residues1
Detailsbinding site for residue IOD B 808
ChainResidue
BHIS614

site_idAD8
Number of Residues1
Detailsbinding site for residue IOD B 810
ChainResidue
BALA733

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PDB entries from 2024-10-09

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