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6PZQ

Structure of the human respiratory syncytial virus M2-1 protein in complex with a short positive-sense gene-end RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0005198molecular_functionstructural molecule activity
A0005515molecular_functionprotein binding
A0008270molecular_functionzinc ion binding
A0019083biological_processviral transcription
A0030430cellular_componenthost cell cytoplasm
A0031564biological_processtranscription antitermination
A0042025cellular_componenthost cell nucleus
A0044423cellular_componentvirion component
A0046782biological_processregulation of viral transcription
A0046872molecular_functionmetal ion binding
A0085033biological_processsymbiont-mediated activation of host NF-kappaB cascade
B0003723molecular_functionRNA binding
B0005198molecular_functionstructural molecule activity
B0005515molecular_functionprotein binding
B0008270molecular_functionzinc ion binding
B0019083biological_processviral transcription
B0030430cellular_componenthost cell cytoplasm
B0031564biological_processtranscription antitermination
B0042025cellular_componenthost cell nucleus
B0044423cellular_componentvirion component
B0046782biological_processregulation of viral transcription
B0046872molecular_functionmetal ion binding
B0085033biological_processsymbiont-mediated activation of host NF-kappaB cascade
C0003723molecular_functionRNA binding
C0005198molecular_functionstructural molecule activity
C0005515molecular_functionprotein binding
C0008270molecular_functionzinc ion binding
C0019083biological_processviral transcription
C0030430cellular_componenthost cell cytoplasm
C0031564biological_processtranscription antitermination
C0042025cellular_componenthost cell nucleus
C0044423cellular_componentvirion component
C0046782biological_processregulation of viral transcription
C0046872molecular_functionmetal ion binding
C0085033biological_processsymbiont-mediated activation of host NF-kappaB cascade
D0003723molecular_functionRNA binding
D0005198molecular_functionstructural molecule activity
D0005515molecular_functionprotein binding
D0008270molecular_functionzinc ion binding
D0019083biological_processviral transcription
D0030430cellular_componenthost cell cytoplasm
D0031564biological_processtranscription antitermination
D0042025cellular_componenthost cell nucleus
D0044423cellular_componentvirion component
D0046782biological_processregulation of viral transcription
D0046872molecular_functionmetal ion binding
D0085033biological_processsymbiont-mediated activation of host NF-kappaB cascade
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 201
ChainResidue
ACYS7
ACYS15
ACYS21
AHIS25

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN B 201
ChainResidue
BCYS7
BCYS15
BCYS21
BHIS25

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN C 201
ChainResidue
CCYS15
CCYS21
CHIS25
CCYS7

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN D 201
ChainResidue
DCYS7
DCYS15
DCYS21
DHIS25

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues27
DetailsZinc finger: {"description":"C3H1-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00723","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24434552","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32697936","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues68
DetailsRegion: {"description":"Oligomerization","evidences":[{"source":"PubMed","id":"22675274","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues380
DetailsRegion: {"description":"Globular core","evidences":[{"source":"PubMed","id":"22675274","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues148
DetailsRegion: {"description":"Binding to the phosphoprotein","evidences":[{"source":"PubMed","id":"32697936","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues20
DetailsSite: {"description":"Involved in RNA-binding","evidences":[{"source":"PubMed","id":"32697936","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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