6PYP
Binary Complex of Human Glycerol 3-Phosphate Dehydrogenase, R269A mutant
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
A | 0006094 | biological_process | gluconeogenesis |
A | 0006127 | biological_process | glycerol-3-phosphate shuttle |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0045821 | biological_process | positive regulation of glycolytic process |
A | 0046168 | biological_process | glycerol-3-phosphate catabolic process |
A | 0047952 | molecular_function | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity |
A | 0051287 | molecular_function | NAD binding |
A | 0070062 | cellular_component | extracellular exosome |
A | 0071320 | biological_process | cellular response to cAMP |
A | 0071356 | biological_process | cellular response to tumor necrosis factor |
A | 0141152 | molecular_function | glycerol-3-phosphate dehydrogenase (NAD+) activity |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
B | 0006094 | biological_process | gluconeogenesis |
B | 0006127 | biological_process | glycerol-3-phosphate shuttle |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0045821 | biological_process | positive regulation of glycolytic process |
B | 0046168 | biological_process | glycerol-3-phosphate catabolic process |
B | 0047952 | molecular_function | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity |
B | 0051287 | molecular_function | NAD binding |
B | 0070062 | cellular_component | extracellular exosome |
B | 0071320 | biological_process | cellular response to cAMP |
B | 0071356 | biological_process | cellular response to tumor necrosis factor |
B | 0141152 | molecular_function | glycerol-3-phosphate dehydrogenase (NAD+) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 19 |
Details | binding site for residue NAD A 401 |
Chain | Residue |
A | SER11 |
A | ILE119 |
A | LYS120 |
A | ASN151 |
A | ILE152 |
A | ALA153 |
A | HOH502 |
A | HOH503 |
A | HOH577 |
A | HOH596 |
A | HOH641 |
A | GLY12 |
A | ASN13 |
A | TRP14 |
A | PHE41 |
A | VAL93 |
A | PRO94 |
A | PHE97 |
A | LEU118 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue PO4 A 402 |
Chain | Residue |
A | LYS240 |
A | SER249 |
A | HOH505 |
A | HOH567 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue 3SY A 403 |
Chain | Residue |
A | LEU129 |
A | LYS130 |
A | LEU131 |
A | GLU134 |
A | ASP195 |
A | PHE242 |
A | CYS243 |
A | SER244 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue POP B 401 |
Chain | Residue |
B | GLY12 |
B | ASN13 |
B | TRP14 |
B | PRO94 |
B | HOH534 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue K B 402 |
Chain | Residue |
B | ALA26 |
B | ALA27 |
B | LEU29 |
B | PHE32 |
B | HOH526 |
B | HOH614 |
Functional Information from PROSITE/UniProt
site_id | PS00957 |
Number of Residues | 22 |
Details | NAD_G3PDH NAD-dependent glycerol-3-phosphate dehydrogenase signature. GALKNVVAvGaGFcdGLgFGdN |
Chain | Residue | Details |
A | GLY201-ASN222 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Active site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000305"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 21 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"16460752","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | Binding site: {} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P13707","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"O35077","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |