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6PTW

NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state B)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005576cellular_componentextracellular region
A0006869biological_processlipid transport
A0008289molecular_functionlipid binding
A0042157biological_processlipoprotein metabolic process
B0000139cellular_componentGolgi membrane
B0000165biological_processMAPK cascade
B0000166molecular_functionnucleotide binding
B0001889biological_processliver development
B0003924molecular_functionGTPase activity
B0003925molecular_functionG protein activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005741cellular_componentmitochondrial outer membrane
B0005789cellular_componentendoplasmic reticulum membrane
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0005925cellular_componentfocal adhesion
B0007165biological_processsignal transduction
B0007265biological_processRas protein signal transduction
B0007565biological_processfemale pregnancy
B0008283biological_processcell population proliferation
B0008542biological_processvisual learning
B0009629biological_processresponse to gravity
B0009898cellular_componentcytoplasmic side of plasma membrane
B0010467biological_processgene expression
B0010628biological_processpositive regulation of gene expression
B0012505cellular_componentendomembrane system
B0014009biological_processglial cell proliferation
B0016020cellular_componentmembrane
B0016601biological_processRac protein signal transduction
B0016787molecular_functionhydrolase activity
B0019002molecular_functionGMP binding
B0019003molecular_functionGDP binding
B0019221biological_processcytokine-mediated signaling pathway
B0021897biological_processforebrain astrocyte development
B0030036biological_processactin cytoskeleton organization
B0030275molecular_functionLRR domain binding
B0030857biological_processnegative regulation of epithelial cell differentiation
B0032228biological_processregulation of synaptic transmission, GABAergic
B0035022biological_processpositive regulation of Rac protein signal transduction
B0035900biological_processresponse to isolation stress
B0035914biological_processskeletal muscle cell differentiation
B0043495molecular_functionprotein-membrane adaptor activity
B0043524biological_processnegative regulation of neuron apoptotic process
B0044877molecular_functionprotein-containing complex binding
B0048169biological_processregulation of long-term neuronal synaptic plasticity
B0048873biological_processhomeostasis of number of cells within a tissue
B0051146biological_processstriated muscle cell differentiation
B0051384biological_processresponse to glucocorticoid
B0051385biological_processresponse to mineralocorticoid
B0051402biological_processneuron apoptotic process
B0051450biological_processmyoblast proliferation
B0060038biological_processcardiac muscle cell proliferation
B0060252biological_processpositive regulation of glial cell proliferation
B0060441biological_processepithelial tube branching involved in lung morphogenesis
B0060509biological_processtype I pneumocyte differentiation
B2000774biological_processpositive regulation of cellular senescence
C0005576cellular_componentextracellular region
C0006869biological_processlipid transport
C0008289molecular_functionlipid binding
C0042157biological_processlipoprotein metabolic process
D0007165biological_processsignal transduction
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue PCW A 401
ChainResidue
AALA353
CPCW611
CPCW614
DPCW503
DPCW511

site_idAC2
Number of Residues4
Detailsbinding site for residue PCW A 402
ChainResidue
APCW405
DPCW508
DPCW512
DPCW514

site_idAC3
Number of Residues4
Detailsbinding site for residue PCW A 403
ChainResidue
APCW407
DPCW507
DPCW513
D17F522

site_idAC4
Number of Residues9
Detailsbinding site for residue PCW A 404
ChainResidue
APHE214
ALEU217
ATRP229
ALEU232
APCW411
CHIS554
DARG359
DGLU425
DPCW510

site_idAC5
Number of Residues5
Detailsbinding site for residue PCW A 405
ChainResidue
APCW402
APCW408
BLYS172
DPCW508
DPCW514

site_idAC6
Number of Residues7
Detailsbinding site for residue PCW A 406
ChainResidue
ALEU239
BLYS104
BPCW202
BPCW203
BPCW204
CPCW618
C17F629

site_idAC7
Number of Residues3
Detailsbinding site for residue PCW A 407
ChainResidue
APCW403
APCW412
D17F522

site_idAC8
Number of Residues8
Detailsbinding site for residue PCW A 408
ChainResidue
AASP246
AVAL250
APCW405
BPCW201
BPCW203
DPCW506
DPCW514
DPCW528

site_idAC9
Number of Residues4
Detailsbinding site for residue 17F A 409
ChainResidue
ALEU371
DPCW501
DPCW503
D17F521

site_idAD1
Number of Residues5
Detailsbinding site for residue PCW A 410
ChainResidue
APCW413
CPCW617
C17F628
DPCW505
DPCW526

site_idAD2
Number of Residues4
Detailsbinding site for residue PCW A 411
ChainResidue
APHE214
APCW404
APCW413
CPCW612

site_idAD3
Number of Residues5
Detailsbinding site for residue PCW A 412
ChainResidue
APCW407
CPCW604
CPCW614
CPCW623
CPCW624

site_idAD4
Number of Residues5
Detailsbinding site for residue PCW A 413
ChainResidue
APCW410
APCW411
CPCW616
CPCW617
DPCW526

site_idAD5
Number of Residues2
Detailsbinding site for residue PCW A 414
ChainResidue
CPCW617
C17F628

site_idAD6
Number of Residues5
Detailsbinding site for residue PCW A 415
ChainResidue
CPCW603
CPCW605
CPCW622
D17F521
DPCW528

site_idAD7
Number of Residues3
Detailsbinding site for residue PCW C 601
ChainResidue
CPCW602
C17F626
D17F523

site_idAD8
Number of Residues7
Detailsbinding site for residue PCW C 602
ChainResidue
ALEU316
CPCW601
CPCW608
C17F626
C17F627
DPCW513
D17F523

site_idAD9
Number of Residues5
Detailsbinding site for residue PCW C 603
ChainResidue
APCW415
DPCW526
DPCW527
DPCW528
D17F530

site_idAE1
Number of Residues8
Detailsbinding site for residue PCW C 604
ChainResidue
APCW412
CPCW606
CPCW622
CPCW624
D17F520
D17F525
D17F529
D17F530

site_idAE2
Number of Residues6
Detailsbinding site for residue PCW C 605
ChainResidue
CPCW611
CPCW613
CPCW619
CPCW622
D17F521
APCW415

site_idAE3
Number of Residues5
Detailsbinding site for residue PCW C 606
ChainResidue
CPCW604
CPCW608
CPCW609
CPCW624
D17F529

site_idAE4
Number of Residues1
Detailsbinding site for residue PCW C 607
ChainResidue
CPCW624

site_idAE5
Number of Residues6
Detailsbinding site for residue PCW C 608
ChainResidue
CPCW602
CPCW606
CPCW609
CPCW624
C17F626
C17F627

site_idAE6
Number of Residues8
Detailsbinding site for residue PCW C 609
ChainResidue
CPCW606
CPCW608
CPCW615
CPCW620
C17F626
C17F631
DPCW512
D17F523

site_idAE7
Number of Residues2
Detailsbinding site for residue PCW C 610
ChainResidue
BPCW203
C17F629

site_idAE8
Number of Residues8
Detailsbinding site for residue PCW C 611
ChainResidue
APCW401
CPCW605
CPCW613
CPCW619
CPCW622
CPCW623
DPCW501
DPCW503

site_idAE9
Number of Residues3
Detailsbinding site for residue PCW C 612
ChainResidue
APCW411
CPCW618
CPCW625

site_idAF1
Number of Residues4
Detailsbinding site for residue PCW C 613
ChainResidue
CPCW605
CPCW611
CPCW619
D17F521

site_idAF2
Number of Residues4
Detailsbinding site for residue PCW C 614
ChainResidue
APCW401
APCW412
CPCW619
CPCW623

site_idAF3
Number of Residues4
Detailsbinding site for residue PCW C 615
ChainResidue
CPCW609
C17F631
DPCW509
DPCW512

site_idAF4
Number of Residues8
Detailsbinding site for residue PCW C 616
ChainResidue
APCW413
BPCW201
BPCW203
CPCW617
CPCW618
CPCW625
DPCW526
DPCW527

site_idAF5
Number of Residues5
Detailsbinding site for residue PCW C 617
ChainResidue
APCW410
APCW413
APCW414
CPCW616
DPCW505

site_idAF6
Number of Residues8
Detailsbinding site for residue PCW C 618
ChainResidue
APCW406
BPCW203
CPCW612
CPCW616
CPCW625
C17F629
D17F524
DPCW528

site_idAF7
Number of Residues6
Detailsbinding site for residue PCW C 619
ChainResidue
CPHE412
CPCW605
CPCW611
CPCW613
CPCW614
DPCW501

site_idAF8
Number of Residues3
Detailsbinding site for residue PCW C 620
ChainResidue
CPCW609
CPCW621
C17F631

site_idAF9
Number of Residues5
Detailsbinding site for residue PCW C 621
ChainResidue
CPCW620
C17F629
C17F630
C17F631
DPCW528

site_idAG1
Number of Residues7
Detailsbinding site for residue PCW C 622
ChainResidue
APCW415
CPCW604
CPCW605
CPCW611
CPCW623
DPCW501
D17F525

site_idAG2
Number of Residues6
Detailsbinding site for residue PCW C 623
ChainResidue
APCW412
CPCW611
CPCW614
CPCW622
CPCW624
D17F525

site_idAG3
Number of Residues6
Detailsbinding site for residue PCW C 624
ChainResidue
APCW412
CPCW604
CPCW606
CPCW607
CPCW608
CPCW623

site_idAG4
Number of Residues6
Detailsbinding site for residue PCW C 625
ChainResidue
CPCW612
CPCW616
CPCW618
C17F629
DPCW527
DPCW528

site_idAG5
Number of Residues6
Detailsbinding site for residue 17F C 626
ChainResidue
CPCW601
CPCW602
CPCW608
CPCW609
C17F627
D17F523

site_idAG6
Number of Residues3
Detailsbinding site for residue 17F C 627
ChainResidue
CPCW602
CPCW608
C17F626

site_idAG7
Number of Residues2
Detailsbinding site for residue 17F C 628
ChainResidue
APCW410
APCW414

site_idAG8
Number of Residues7
Detailsbinding site for residue 17F C 629
ChainResidue
APCW406
BPCW203
CPCW610
CPCW618
CPCW621
CPCW625
DPCW528

site_idAG9
Number of Residues4
Detailsbinding site for residue 17F C 630
ChainResidue
CPCW621
C17F631
D17F529
D17F530

site_idAH1
Number of Residues7
Detailsbinding site for residue 17F C 631
ChainResidue
CPCW609
CPCW615
CPCW620
CPCW621
C17F630
DPCW508
DPCW512

site_idAH2
Number of Residues12
Detailsbinding site for residue PCW B 201
ChainResidue
APCW408
BGLU3
BPCW202
BPCW203
BPCW204
CPCW616
DPCW504
DPCW506
DPCW510
DPCW515
DPCW527
DPCW528

site_idAH3
Number of Residues7
Detailsbinding site for residue PCW B 202
ChainResidue
APCW406
BGLU3
BPCW201
DPCW504
DPCW506
DPCW510
D17F524

site_idAH4
Number of Residues11
Detailsbinding site for residue PCW B 203
ChainResidue
APCW406
APCW408
BLYS167
BSER171
BPCW201
BPCW204
CPCW610
CPCW616
CPCW618
C17F629
DPCW506

site_idAH5
Number of Residues3
Detailsbinding site for residue PCW B 204
ChainResidue
APCW406
BPCW201
BPCW203

site_idAH6
Number of Residues20
Detailsbinding site for residue GNP B 205
ChainResidue
BALA11
BGLY13
BVAL14
BGLY15
BLYS16
BSER17
BALA18
BVAL29
BASP30
BTYR32
BPRO34
BTHR35
BGLY60
BASN116
BLYS117
BLEU120
BSER145
BALA146
BLYS147
BMG206

site_idAH7
Number of Residues4
Detailsbinding site for residue MG B 206
ChainResidue
BSER17
BASP33
BTHR35
BGNP205

site_idAH8
Number of Residues8
Detailsbinding site for residue PCW D 501
ChainResidue
A17F409
CPCW611
CPCW619
CPCW622
DILE454
DPCW515
D17F521
D17F525

site_idAH9
Number of Residues9
Detailsbinding site for residue PCW D 502
ChainResidue
DLEU402
DLYS406
DGLY407
DLYS409
DLEU436
DTRP487
DPCW505
DPCW510
DPCW518

site_idAI1
Number of Residues5
Detailsbinding site for residue PCW D 503
ChainResidue
APCW401
A17F409
CPCW611
DPCW511
D17F522

site_idAI2
Number of Residues11
Detailsbinding site for residue PCW D 504
ChainResidue
BMET1
BGLU3
BLEU52
BPCW201
BPCW202
DASP486
DTRP487
DPCW505
DPCW510
DPCW516
D17F524

site_idAI3
Number of Residues7
Detailsbinding site for residue PCW D 505
ChainResidue
APCW410
CPCW617
DLEU436
DPCW502
DPCW504
DPCW518
D17F519

site_idAI4
Number of Residues10
Detailsbinding site for residue PCW D 506
ChainResidue
APCW408
BPCW201
BPCW202
BPCW203
DPHE451
DPCW509
DPCW515
DPCW516
D17F520
DPCW528

site_idAI5
Number of Residues6
Detailsbinding site for residue PCW D 507
ChainResidue
APCW403
DPCW513
DPCW517
D17F522
D17F523
D17F525

site_idAI6
Number of Residues8
Detailsbinding site for residue PCW D 508
ChainResidue
APCW402
APCW405
C17F631
DPCW509
DPCW512
DPCW517
D17F520
D17F523

site_idAI7
Number of Residues4
Detailsbinding site for residue PCW D 509
ChainResidue
CPCW615
DPCW506
DPCW508
D17F520

site_idAI8
Number of Residues7
Detailsbinding site for residue PCW D 510
ChainResidue
APCW404
BPCW201
BPCW202
DTRP487
DPCW502
DPCW504
D17F524

site_idAI9
Number of Residues3
Detailsbinding site for residue PCW D 511
ChainResidue
APCW401
DGLU474
DPCW503

site_idAJ1
Number of Residues6
Detailsbinding site for residue PCW D 512
ChainResidue
APCW402
CPCW609
CPCW615
C17F631
DPCW508
DPCW514

site_idAJ2
Number of Residues5
Detailsbinding site for residue PCW D 513
ChainResidue
APCW403
CPCW602
DPCW507
DPCW517
D17F523

site_idAJ3
Number of Residues5
Detailsbinding site for residue PCW D 514
ChainResidue
APCW402
APCW405
APCW408
BCYS185
DPCW512

site_idAJ4
Number of Residues7
Detailsbinding site for residue PCW D 515
ChainResidue
BPCW201
DASP453
DPRO481
DPCW501
DPCW506
DPCW516
D17F520

site_idAJ5
Number of Residues9
Detailsbinding site for residue PCW D 516
ChainResidue
BMET1
DPRO481
DTHR482
DPCW504
DPCW506
DPCW515
D17F519
DPCW527
D17F529

site_idAJ6
Number of Residues9
Detailsbinding site for residue PCW D 517
ChainResidue
DPHE451
DGLN456
DLYS457
DPHE458
DPCW507
DPCW508
DPCW513
D17F520
D17F525

site_idAJ7
Number of Residues5
Detailsbinding site for residue PCW D 518
ChainResidue
DVAL434
DTHR438
DPCW502
DPCW505
D17F519

site_idAJ8
Number of Residues4
Detailsbinding site for residue 17F D 519
ChainResidue
DLYS408
DPCW505
DPCW516
DPCW518

site_idAJ9
Number of Residues8
Detailsbinding site for residue 17F D 520
ChainResidue
CPCW604
DPCW506
DPCW508
DPCW509
DPCW515
DPCW517
DPCW528
D17F530

site_idAK1
Number of Residues5
Detailsbinding site for residue 17F D 521
ChainResidue
A17F409
APCW415
CPCW605
CPCW613
DPCW501

site_idAK2
Number of Residues5
Detailsbinding site for residue 17F D 522
ChainResidue
APCW403
APCW407
DPCW503
DPCW507
D17F525

site_idAK3
Number of Residues7
Detailsbinding site for residue 17F D 523
ChainResidue
CPCW601
CPCW602
CPCW609
C17F626
DPCW507
DPCW508
DPCW513

site_idAK4
Number of Residues4
Detailsbinding site for residue 17F D 524
ChainResidue
BPCW202
CPCW618
DPCW504
DPCW510

site_idAK5
Number of Residues9
Detailsbinding site for residue 17F D 525
ChainResidue
CPCW604
CPCW622
CPCW623
DLYS457
DHIS475
DPCW501
DPCW507
DPCW517
D17F522

site_idAK6
Number of Residues5
Detailsbinding site for residue PCW D 526
ChainResidue
APCW410
APCW413
CPCW603
CPCW616
DPCW527

site_idAK7
Number of Residues8
Detailsbinding site for residue PCW D 527
ChainResidue
BPCW201
CPCW603
CPCW616
CPCW625
DPCW516
DPCW526
DPCW528
D17F530

site_idAK8
Number of Residues12
Detailsbinding site for residue PCW D 528
ChainResidue
APCW408
APCW415
BPCW201
CPCW603
CPCW618
CPCW621
CPCW625
C17F629
DPCW506
D17F520
DPCW527
D17F530

site_idAK9
Number of Residues5
Detailsbinding site for residue 17F D 529
ChainResidue
CPCW604
CPCW606
C17F630
DPCW516
D17F530

site_idAL1
Number of Residues7
Detailsbinding site for residue 17F D 530
ChainResidue
CPCW603
CPCW604
C17F630
D17F520
DPCW527
DPCW528
D17F529

site_idAL2
Number of Residues4
Detailsbinding site for residue ZN D 531
ChainResidue
DCYS452
DCYS455
DHIS473
DCYS476

site_idAL3
Number of Residues4
Detailsbinding site for residue ZN D 532
ChainResidue
DHIS439
DCYS465
DCYS468
DCYS484

Functional Information from PROSITE/UniProt
site_idPS00479
Number of Residues46
DetailsZF_DAG_PE_1 Zinc finger phorbol-ester/DAG-type signature. HnFarktflklaf.CdiCqkfLlngfr.....CqtCgykfHehCstkvptm..C
ChainResidueDetails
DHIS439-CYS484

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues46
DetailsZN_FING: Phorbol-ester/DAG-type => ECO:0000255|PROSITE-ProRule:PRU00226
ChainResidueDetails
DTHR438-CYS484
BVAL29
BALA59
BASN116

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING:
ChainResidueDetails
DHIS439
DCYS452
DCYS455
DCYS465
DCYS468
DHIS473
DCYS476
DCYS484

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N-acetylthreonine; in GTPase KRas, N-terminally processed => ECO:0000269|Ref.17
ChainResidueDetails
BTHR2

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:22711838
ChainResidueDetails
BLYS104

site_idSWS_FT_FI5
Number of Residues1
DetailsLIPID: S-palmitoyl cysteine => ECO:0000305|PubMed:29239724
ChainResidueDetails
BLYS180

site_idSWS_FT_FI6
Number of Residues1
DetailsLIPID: N6-palmitoyl lysine => ECO:0000269|PubMed:29239724
ChainResidueDetails
BLYS182

site_idSWS_FT_FI7
Number of Residues2
DetailsLIPID: N6-palmitoyl lysine => ECO:0000305|PubMed:29239724
ChainResidueDetails
BLYS184
BCYS185

site_idSWS_FT_FI8
Number of Residues1
DetailsCARBOHYD: (Microbial infection) O-linked (Glc) threonine; by P.sordellii toxin TcsL => ECO:0000269|PubMed:19744486
ChainResidueDetails
BTHR35

site_idSWS_FT_FI9
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:30442762
ChainResidueDetails
BMET170

237423

PDB entries from 2025-06-11

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