6PM9
Crystal structure of the core catalytic domain of human O-GlcNAcase bound to MK-8719
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | binding site for residue OQ1 A 501 |
Chain | Residue |
A | GLY67 |
A | VAL254 |
A | TRP278 |
A | ASN280 |
A | ALA283 |
A | ASP285 |
A | TYR286 |
A | ASN313 |
A | PHE68 |
A | TYR69 |
A | LYS98 |
A | ASP174 |
A | ASP175 |
A | CYS215 |
A | TYR219 |
A | THR250 |
site_id | AC2 |
Number of Residues | 16 |
Details | binding site for residue OQ1 B 501 |
Chain | Residue |
B | GLY67 |
B | PHE68 |
B | TYR69 |
B | LYS98 |
B | ASP174 |
B | ASP175 |
B | CYS215 |
B | TYR219 |
B | THR250 |
B | VAL254 |
B | VAL255 |
B | TRP278 |
B | ASN280 |
B | ASP285 |
B | TYR286 |
B | ASN313 |
site_id | AC3 |
Number of Residues | 16 |
Details | binding site for residue OQ1 C 501 |
Chain | Residue |
C | GLY67 |
C | TYR69 |
C | LYS98 |
C | ASP174 |
C | CYS215 |
C | TYR219 |
C | THR250 |
C | VAL254 |
C | VAL255 |
C | TRP278 |
C | ASN280 |
C | ALA283 |
C | ASP285 |
C | TYR286 |
C | ASN313 |
E | TRP679 |
site_id | AC4 |
Number of Residues | 14 |
Details | binding site for residue OQ1 D 501 |
Chain | Residue |
D | GLY67 |
D | LYS98 |
D | ASP174 |
D | CYS215 |
D | TYR219 |
D | THR250 |
D | VAL254 |
D | VAL255 |
D | TRP278 |
D | ASN280 |
D | ALA283 |
D | ASP285 |
D | ASN313 |
H | TRP679 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU01353, ECO:0000305|PubMed:16533067 |
Chain | Residue | Details |
A | ASP175 | |
B | ASP175 | |
C | ASP175 | |
D | ASP175 |
site_id | SWS_FT_FI2 |
Number of Residues | 28 |
Details | BINDING: BINDING => ECO:0000269|PubMed:28939839, ECO:0007744|PDB:5VVT |
Chain | Residue | Details |
A | GLY67 | |
B | ASP174 | |
B | ASP175 | |
B | TYR219 | |
B | ASP285 | |
B | ASN313 | |
C | GLY67 | |
C | LYS98 | |
C | ASP174 | |
C | ASP175 | |
C | TYR219 | |
A | LYS98 | |
C | ASP285 | |
C | ASN313 | |
D | GLY67 | |
D | LYS98 | |
D | ASP174 | |
D | ASP175 | |
D | TYR219 | |
D | ASP285 | |
D | ASN313 | |
A | ASP174 | |
A | ASP175 | |
A | TYR219 | |
A | ASP285 | |
A | ASN313 | |
B | GLY67 | |
B | LYS98 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER364 | |
B | SER364 | |
C | SER364 | |
D | SER364 |