6PK3
Alanine-glyoxylate aminotransferase 1 (AGT1) from Arabidopsis thaliana
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003729 | molecular_function | mRNA binding |
| A | 0004760 | molecular_function | L-serine-pyruvate transaminase activity |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0005777 | cellular_component | peroxisome |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0008453 | molecular_function | alanine-glyoxylate transaminase activity |
| A | 0008483 | molecular_function | transaminase activity |
| A | 0009507 | cellular_component | chloroplast |
| A | 0009570 | cellular_component | chloroplast stroma |
| A | 0009853 | biological_process | photorespiration |
| A | 0016740 | molecular_function | transferase activity |
| A | 0019265 | biological_process | glycine biosynthetic process, by transamination of glyoxylate |
| A | 0048046 | cellular_component | apoplast |
| A | 0050281 | molecular_function | L-serine-glyoxylate transaminase activity |
| B | 0003729 | molecular_function | mRNA binding |
| B | 0004760 | molecular_function | L-serine-pyruvate transaminase activity |
| B | 0005739 | cellular_component | mitochondrion |
| B | 0005777 | cellular_component | peroxisome |
| B | 0005829 | cellular_component | cytosol |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0008453 | molecular_function | alanine-glyoxylate transaminase activity |
| B | 0008483 | molecular_function | transaminase activity |
| B | 0009507 | cellular_component | chloroplast |
| B | 0009570 | cellular_component | chloroplast stroma |
| B | 0009853 | biological_process | photorespiration |
| B | 0016740 | molecular_function | transferase activity |
| B | 0019265 | biological_process | glycine biosynthetic process, by transamination of glyoxylate |
| B | 0048046 | cellular_component | apoplast |
| B | 0050281 | molecular_function | L-serine-glyoxylate transaminase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 15 |
| Details | binding site for residue PLP A 501 |
| Chain | Residue |
| A | THR68 |
| A | GLN200 |
| A | LYS201 |
| A | TYR249 |
| A | THR250 |
| A | HOH607 |
| A | HOH683 |
| A | GLY69 |
| A | THR70 |
| A | TRP73 |
| A | PHE95 |
| A | ASN146 |
| A | THR148 |
| A | ASP175 |
| A | VAL177 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue FMT A 502 |
| Chain | Residue |
| A | ARG36 |
| A | PHE95 |
| A | THR148 |
| A | ARG347 |
| A | HOH607 |
| A | HOH610 |
| site_id | AC3 |
| Number of Residues | 15 |
| Details | binding site for residue PLP B 501 |
| Chain | Residue |
| B | THR68 |
| B | GLY69 |
| B | THR70 |
| B | TRP73 |
| B | PHE95 |
| B | ASN146 |
| B | THR148 |
| B | ASP175 |
| B | VAL177 |
| B | GLN200 |
| B | LYS201 |
| B | TYR249 |
| B | THR250 |
| B | HOH609 |
| B | HOH638 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue CL B 502 |
| Chain | Residue |
| B | ARG36 |
| B | PHE95 |
| B | ARG347 |
| B | HOH625 |
Functional Information from PROSITE/UniProt
| site_id | PS00595 |
| Number of Residues | 21 |
| Details | AA_TRANSFER_CLASS_5 Aminotransferases class-V pyridoxal-phosphate attachment site. VDVAltGSQKalslptGlGiV |
| Chain | Residue | Details |
| A | VAL192-VAL212 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Motif: {"description":"Microbody targeting signal","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31681359","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6PK1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6PK3","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31681359","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6PK1","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"22092075","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
