Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PBF

ZINC9155420-bound TRPV5 in nanodiscs

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005262molecular_functioncalcium channel activity
A0005516molecular_functioncalmodulin binding
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0006816biological_processcalcium ion transport
A0016020cellular_componentmembrane
A0016324cellular_componentapical plasma membrane
A0034220biological_processmonoatomic ion transmembrane transport
A0035809biological_processregulation of urine volume
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0051289biological_processprotein homotetramerization
A0055074biological_processcalcium ion homeostasis
A0055085biological_processtransmembrane transport
A0070588biological_processcalcium ion transmembrane transport
A0098655biological_processmonoatomic cation transmembrane transport
A0098703biological_processcalcium ion import across plasma membrane
B0005216molecular_functionmonoatomic ion channel activity
B0005262molecular_functioncalcium channel activity
B0005516molecular_functioncalmodulin binding
B0005886cellular_componentplasma membrane
B0006811biological_processmonoatomic ion transport
B0006816biological_processcalcium ion transport
B0016020cellular_componentmembrane
B0016324cellular_componentapical plasma membrane
B0034220biological_processmonoatomic ion transmembrane transport
B0035809biological_processregulation of urine volume
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0051289biological_processprotein homotetramerization
B0055074biological_processcalcium ion homeostasis
B0055085biological_processtransmembrane transport
B0070588biological_processcalcium ion transmembrane transport
B0098655biological_processmonoatomic cation transmembrane transport
B0098703biological_processcalcium ion import across plasma membrane
C0005216molecular_functionmonoatomic ion channel activity
C0005262molecular_functioncalcium channel activity
C0005516molecular_functioncalmodulin binding
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0006816biological_processcalcium ion transport
C0016020cellular_componentmembrane
C0016324cellular_componentapical plasma membrane
C0034220biological_processmonoatomic ion transmembrane transport
C0035809biological_processregulation of urine volume
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C0051289biological_processprotein homotetramerization
C0055074biological_processcalcium ion homeostasis
C0055085biological_processtransmembrane transport
C0070588biological_processcalcium ion transmembrane transport
C0098655biological_processmonoatomic cation transmembrane transport
C0098703biological_processcalcium ion import across plasma membrane
D0005216molecular_functionmonoatomic ion channel activity
D0005262molecular_functioncalcium channel activity
D0005516molecular_functioncalmodulin binding
D0005886cellular_componentplasma membrane
D0006811biological_processmonoatomic ion transport
D0006816biological_processcalcium ion transport
D0016020cellular_componentmembrane
D0016324cellular_componentapical plasma membrane
D0034220biological_processmonoatomic ion transmembrane transport
D0035809biological_processregulation of urine volume
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
D0051289biological_processprotein homotetramerization
D0055074biological_processcalcium ion homeostasis
D0055085biological_processtransmembrane transport
D0070588biological_processcalcium ion transmembrane transport
D0098655biological_processmonoatomic cation transmembrane transport
D0098703biological_processcalcium ion import across plasma membrane
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue O6V A 1001
ChainResidue
AMET491
ACYS494
CILE564

site_idAC2
Number of Residues3
Detailsbinding site for residue O6V A 1002
ChainResidue
AILE564
BMET491
BCYS494

site_idAC3
Number of Residues3
Detailsbinding site for residue O6V B 1001
ChainResidue
BILE564
DMET491
DCYS494

site_idAC4
Number of Residues3
Detailsbinding site for residue O6V C 1001
ChainResidue
CMET491
CCYS494
DILE564

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2040
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:29323279
ChainResidueDetails
AMET1-PRO327
CARG409-THR419
CARG470-ARG492
CMET578-PHE730
DMET1-PRO327
DARG409-THR419
DARG470-ARG492
DMET578-PHE730
AARG409-THR419
AARG470-ARG492
AMET578-PHE730
BMET1-PRO327
BARG409-THR419
BARG470-ARG492
BMET578-PHE730
CMET1-PRO327

site_idSWS_FT_FI2
Number of Residues496
DetailsTRANSMEM: Helical => ECO:0000269|PubMed:29323279
ChainResidueDetails
ATYR328-ILE348
BGLY449-ALA469
BPHE493-GLN513
BILE557-MET577
CTYR328-ILE348
CLEU386-PHE408
CILE420-MET442
CGLY449-ALA469
CPHE493-GLN513
CILE557-MET577
DTYR328-ILE348
ALEU386-PHE408
DLEU386-PHE408
DILE420-MET442
DGLY449-ALA469
DPHE493-GLN513
DILE557-MET577
AILE420-MET442
AGLY449-ALA469
APHE493-GLN513
AILE557-MET577
BTYR328-ILE348
BLEU386-PHE408
BILE420-MET442

site_idSWS_FT_FI3
Number of Residues164
DetailsTOPO_DOM: Extracellular => ECO:0000269|PubMed:29323279
ChainResidueDetails
ATYR349-ARG385
AARG443-ASN448
BTYR349-ARG385
BARG443-ASN448
CTYR349-ARG385
CARG443-ASN448
DTYR349-ARG385
DARG443-ASN448

site_idSWS_FT_FI4
Number of Residues80
DetailsINTRAMEM: Pore-forming => ECO:0000269|PubMed:29323279
ChainResidueDetails
ASER524-PRO544
BSER524-PRO544
CSER524-PRO544
DSER524-PRO544

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:29323279
ChainResidueDetails
AASP542
BASP542
CASP542
DASP542

site_idSWS_FT_FI6
Number of Residues4
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P69744
ChainResidueDetails
ATHR685
BTHR685
CTHR685
DTHR685

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P69744
ChainResidueDetails
ASER689
BSER689
CSER689
DSER689

site_idSWS_FT_FI8
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN358
BASN358
CASN358
DASN358

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon