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6P98

OXA-48 carbapanemase, meropenem complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0017001biological_processantibiotic catabolic process
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0017001biological_processantibiotic catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue KE1 A 301
ChainResidue
AALA69
AHOH517
AHOH530
ASER70
ASER118
AVAL120
ALEU158
ATHR209
AGLY210
ATYR211
AARG250

site_idAC2
Number of Residues2
Detailsbinding site for residue CL A 302
ChainResidue
ALYS73
ATRP157

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 303
ChainResidue
AARG206
BARG206

site_idAC4
Number of Residues5
Detailsbinding site for residue CA A 304
ChainResidue
AGLU37
AHIS38
AGLU256
AHOH506
AHOH544

site_idAC5
Number of Residues2
Detailsbinding site for residue CA A 305
ChainResidue
AGLU27
AHOH529

site_idAC6
Number of Residues6
Detailsbinding site for residue CD A 306
ChainResidue
AGLU37
AGLU125
AGLU256
AHOH401
AHOH506
AHOH550

site_idAC7
Number of Residues2
Detailsbinding site for residue CL B 302
ChainResidue
BLYS73
BTRP157

site_idAC8
Number of Residues5
Detailsbinding site for residue CL B 303
ChainResidue
AHOH558
BHOH413
BHOH505
BHOH507
BHOH514

site_idAC9
Number of Residues4
Detailsbinding site for residue CL B 304
ChainResidue
AHOH557
AHOH561
BHOH499
BHOH508

site_idAD1
Number of Residues6
Detailsbinding site for residue CA B 305
ChainResidue
AASP143
AGLU147
AHOH412
BASP143
BGLU147
BHOH421

site_idAD2
Number of Residues6
Detailsbinding site for residue CD B 306
ChainResidue
AGLU147
BASP143
BHOH402
BHOH465
BHOH468
BHOH502

site_idAD3
Number of Residues14
Detailsbinding site for Di-peptide KE1 B 301 and SER B 70
ChainResidue
BPRO68
BALA69
BTHR71
BPHE72
BLYS73
BSER118
BVAL120
BLEU158
BLYS208
BTHR209
BGLY210
BTYR211
BARG250
BHOH495

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000255|PIRSR:PIRSR602137-50, ECO:0000269|PubMed:25406838, ECO:0000269|PubMed:26731698, ECO:0000269|PubMed:31358584, ECO:0000269|PubMed:32150407, ECO:0007744|PDB:4WMC, ECO:0007744|PDB:5FAQ, ECO:0007744|PDB:5FAS, ECO:0007744|PDB:6P97, ECO:0007744|PDB:6P98, ECO:0007744|PDB:6P99, ECO:0007744|PDB:6P9C, ECO:0007744|PDB:6V1O
ChainResidueDetails
ASER70
BSER70

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q8RLA6
ChainResidueDetails
ASER70
ASER118
AARG250
BSER70
BSER118
BARG250

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P13661
ChainResidueDetails
ALYS73
BLYS73

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: N6-carboxylysine => ECO:0000255|PIRSR:PIRSR602137-50, ECO:0000269|PubMed:19477418, ECO:0000269|PubMed:25406838, ECO:0007744|PDB:3HBR, ECO:0007744|PDB:4WMC
ChainResidueDetails
ALYS73
BLYS73

235458

PDB entries from 2025-04-30

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