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6P8B

E.coli LpxD in complex with peptide FITC-RJPXD33

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006629biological_processlipid metabolic process
A0009245biological_processlipid A biosynthetic process
A0016020cellular_componentmembrane
A0016410molecular_functionN-acyltransferase activity
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
A0042802molecular_functionidentical protein binding
A0046677biological_processresponse to antibiotic
A0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006629biological_processlipid metabolic process
B0009245biological_processlipid A biosynthetic process
B0016020cellular_componentmembrane
B0016410molecular_functionN-acyltransferase activity
B0016740molecular_functiontransferase activity
B0016746molecular_functionacyltransferase activity
B0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
B0042802molecular_functionidentical protein binding
B0046677biological_processresponse to antibiotic
B0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006629biological_processlipid metabolic process
C0009245biological_processlipid A biosynthetic process
C0016020cellular_componentmembrane
C0016410molecular_functionN-acyltransferase activity
C0016740molecular_functiontransferase activity
C0016746molecular_functionacyltransferase activity
C0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
C0042802molecular_functionidentical protein binding
C0046677biological_processresponse to antibiotic
C0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 401
ChainResidue
AHOH562
AHOH677
BHOH700
BHOH818
CHOH622
CHOH810

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 402
ChainResidue
BHOH631
CASN121
CHOH684
AASN121
AHOH529
BASN121

site_idAC3
Number of Residues15
Detailsbinding site for residue O3V B 501
ChainResidue
APHE183
ATYR185
AILE254
AALA256
AASN274
AHOH557
BILE230
BALA250
BILE267
BGLY268
BGLY269
BVAL285
BHOH611
CGLU49
CHOH702

site_idAC4
Number of Residues13
Detailsbinding site for residue O3V C 501
ChainResidue
BGLU49
BPHE183
BTYR185
BILE254
BASN274
BHOH746
CALA250
CMET266
CGLY268
CGLY269
CHOH604
CHOH685
CHOH698

Functional Information from PROSITE/UniProt
site_idPS00101
Number of Residues29
DetailsHEXAPEP_TRANSFERASES Hexapeptide-repeat containing-transferases signature. IApsAvIdatAkLGnnVsIGanAvIesgV
ChainResidueDetails
AILE100-VAL128
AILE106-VAL134
ALEU130-VAL158
AILE225-VAL253

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI2
Number of Residues3
DetailsSite: {"description":"Involved in determining the hydroxyacyl-ACP selectivity"}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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