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6P86

E.coli LpxD in complex with compound 4.1

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0009245biological_processlipid A biosynthetic process
A0016410molecular_functionN-acyltransferase activity
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
A0042802molecular_functionidentical protein binding
A0046677biological_processresponse to antibiotic
A0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0009245biological_processlipid A biosynthetic process
B0016410molecular_functionN-acyltransferase activity
B0016740molecular_functiontransferase activity
B0016746molecular_functionacyltransferase activity
B0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
B0042802molecular_functionidentical protein binding
B0046677biological_processresponse to antibiotic
B0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
C0005515molecular_functionprotein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0009245biological_processlipid A biosynthetic process
C0016410molecular_functionN-acyltransferase activity
C0016740molecular_functiontransferase activity
C0016746molecular_functionacyltransferase activity
C0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
C0042802molecular_functionidentical protein binding
C0046677biological_processresponse to antibiotic
C0103118molecular_functionUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 401
ChainResidue
AHOH598
AHOH715
BHOH680
BHOH845
CHOH659
CHOH844

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 402
ChainResidue
BHOH678
CASN121
CHOH628
AASN121
AHOH541
BASN121

site_idAC3
Number of Residues9
Detailsbinding site for residue O4S A 403
ChainResidue
AALA248
AALA250
AGLY268
AGLY269
ATHR286
AGLY287
CVAL272
CASN274
CMET290

site_idAC4
Number of Residues12
Detailsbinding site for residue O3V B 501
ChainResidue
APHE183
AILE254
AALA256
BALA250
BGLY268
BGLY269
BVAL285
BHOH610
BHOH643
BHOH669
BHOH714
CGLU49

site_idAC5
Number of Residues12
Detailsbinding site for residue O3V C 501
ChainResidue
BGLU49
BPHE183
BTYR185
BILE254
BASN274
BHOH683
CALA250
CGLY268
CGLY269
CHOH612
CHOH633
CHOH718

Functional Information from PROSITE/UniProt
site_idPS00101
Number of Residues29
DetailsHEXAPEP_TRANSFERASES Hexapeptide-repeat containing-transferases signature. IApsAvIdatAkLGnnVsIGanAvIesgV
ChainResidueDetails
AILE100-VAL128
AILE106-VAL134
ALEU130-VAL158
AILE225-VAL253

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:18422345
ChainResidueDetails
AHIS239
BHIS239
CHIS239

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Involved in determining the hydroxyacyl-ACP selectivity
ChainResidueDetails
AMET290
BMET290
CMET290

223532

PDB entries from 2024-08-07

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