Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P74

OLD nuclease from Thermus Scotoductus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004518molecular_functionnuclease activity
A0004527molecular_functionexonuclease activity
A0005524molecular_functionATP binding
A0006259biological_processDNA metabolic process
A0016787molecular_functionhydrolase activity
A0016887molecular_functionATP hydrolysis activity
A0046872molecular_functionmetal ion binding
A0051908molecular_functiondouble-stranded DNA 5'-3' DNA exonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue PT A 601
ChainResidue
AARG56
AHOH726

site_idAC2
Number of Residues4
Detailsbinding site for residue PT A 602
ChainResidue
ACYS12
AGLY31
ATHR36
ASO4603

site_idAC3
Number of Residues8
Detailsbinding site for residue SO4 A 603
ChainResidue
ALYS34
ATHR35
ATHR36
AGLN59
APT602
AGLY31
AALA32
AGLY33

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 604
ChainResidue
AMET1
AASP77
AHIS132
AALA133

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 605
ChainResidue
AGLY126
AGLY126
ATHR127
AEPE613

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 606
ChainResidue
AVAL336
ASER337
ATYR338
AALA421

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 607
ChainResidue
APRO29
AARG327
ALYS328

site_idAC8
Number of Residues3
Detailsbinding site for residue SO4 A 608
ChainResidue
AGLU443
AARG446
AASP491

site_idAC9
Number of Residues3
Detailsbinding site for residue SO4 A 609
ChainResidue
AHIS283
AGLN285
AARG288

site_idAD1
Number of Residues5
Detailsbinding site for residue SO4 A 610
ChainResidue
ATRP49
APRO50
AVAL103
AASP104
ALEU105

site_idAD2
Number of Residues5
Detailsbinding site for residue EPE A 611
ChainResidue
ATRP435
AGLN449
ASER478
AGLU480
AARG487

site_idAD3
Number of Residues6
Detailsbinding site for residue EPE A 612
ChainResidue
APRO22
ALEU23
AASN318
AGLU321
AARG351
ALYS355

site_idAD4
Number of Residues4
Detailsbinding site for residue EPE A 613
ChainResidue
AVAL125
ATHR127
AASP245
ASO4605

site_idAD5
Number of Residues6
Detailsbinding site for residue SM A 614
ChainResidue
AASP431
AGLU444
AGLU480
AHOH703
AHOH708
AHOH713

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues123
DetailsRegion: {"description":"ATPase domain C-terminus","evidences":[{"source":"PubMed","id":"32009148","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues21
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Stabilizes transition state or protonates leaving group","evidences":[{"source":"PubMed","id":"32009148","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"32009148","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon