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6P4W

XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0006281biological_processDNA repair
A0006367biological_processtranscription initiation at RNA polymerase II promoter
A0016787molecular_functionhydrolase activity
A0016853molecular_functionisomerase activity
A0032508biological_processDNA duplex unwinding
A0043138molecular_function3'-5' DNA helicase activity
A0097550cellular_componenttranscription preinitiation complex
C0003677molecular_functionDNA binding
C0004386molecular_functionhelicase activity
C0005524molecular_functionATP binding
C0006281biological_processDNA repair
C0006367biological_processtranscription initiation at RNA polymerase II promoter
C0016787molecular_functionhydrolase activity
C0016853molecular_functionisomerase activity
C0032508biological_processDNA duplex unwinding
C0043138molecular_function3'-5' DNA helicase activity
C0097550cellular_componenttranscription preinitiation complex
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PO4 A 501
ChainResidue
AGLY93
AGLY95
ALYS96
AARG127

site_idAC2
Number of Residues2
Detailsbinding site for residue MG A 502
ChainResidue
ALYS96
AASP174

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL A 503
ChainResidue
ALYS426
AHOH613
AHOH626
AHIS178
ASER181
AARG205

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 504
ChainResidue
ALYS251
AASP255

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 505
ChainResidue
AGLU357
AGLU360
AILE361

site_idAC6
Number of Residues1
Detailsbinding site for residue CL A 506
ChainResidue
AASP155

site_idAC7
Number of Residues1
Detailsbinding site for residue CL A 507
ChainResidue
ATYR3

site_idAC8
Number of Residues2
Detailsbinding site for residue CL A 508
ChainResidue
AVAL348
ATHR353

site_idAC9
Number of Residues2
Detailsbinding site for residue CL A 509
ChainResidue
AALA235
AARG412

site_idAD1
Number of Residues1
Detailsbinding site for residue CL A 510
ChainResidue
ALYS66

site_idAD2
Number of Residues2
Detailsbinding site for residue CL A 511
ChainResidue
AARG37
AARG40

site_idAD3
Number of Residues4
Detailsbinding site for residue CL B 401
ChainResidue
BTYR182
BILE295
BGLU310
BLYS323

site_idAD4
Number of Residues5
Detailsbinding site for residue PO4 C 501
ChainResidue
CGLY93
CGLY95
CLYS96
CTHR97
CARG127

site_idAD5
Number of Residues1
Detailsbinding site for residue MG C 502
ChainResidue
CASP174

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL C 503
ChainResidue
CSER245
CLYS426
CHOH610
CHOH614

site_idAD7
Number of Residues1
Detailsbinding site for residue CL C 504
ChainResidue
CLYS251

site_idAD8
Number of Residues1
Detailsbinding site for residue CL C 505
ChainResidue
CTYR3

site_idAD9
Number of Residues1
Detailsbinding site for residue CL C 507
ChainResidue
CASP155

site_idAE1
Number of Residues2
Detailsbinding site for residue CL C 508
ChainResidue
CGLU357
CTYR370

site_idAE2
Number of Residues1
Detailsbinding site for residue CL C 509
ChainResidue
CHIS178

site_idAE3
Number of Residues1
Detailsbinding site for residue CL C 510
ChainResidue
CASP155

site_idAE4
Number of Residues2
Detailsbinding site for residue CL D 401
ChainResidue
CHIS299
DGLU47

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:O29890
ChainResidueDetails
BGLU265
BASP297
BGLU310
DGLU265
DASP297
DGLU310

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000305|PubMed:32986831
ChainResidueDetails
AARG127
CARG127

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Wedge residue => ECO:0000269|PubMed:32986831
ChainResidueDetails
APHE278
CPHE278

221051

PDB entries from 2024-06-12

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