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6P1W

Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing undamaged template dG and bound incoming CMPCPP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue 2TM A 501
ChainResidue
AGLY319
ATRP434
ATHR435
AGLY436
ALYS438
AMG502
AMG503
AHOH631
AHOH648
AHOH656
AHOH692
AGLY320
AHOH707
AHOH711
AHOH748
AHOH756
AHOH771
PDA4
TDG5
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AGLY433

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 502
ChainResidue
AASP330
AASP332
AASP418
A2TM501
AMG503
AHOH631
PDA4

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 503
ChainResidue
AASP330
AASP332
A2TM501
AMG502
AHOH707

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 504
ChainResidue
ATHR241
AILE243
AVAL246
AHOH843
PDT3
PHOH111

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 505
ChainResidue
ASER172
AGLY174
AARG175

site_idAC6
Number of Residues3
Detailsbinding site for residue CL A 506
ChainResidue
AARG445
ASER458
TDA7

site_idAC7
Number of Residues3
Detailsbinding site for residue CL A 507
ChainResidue
ASER474
AGLU475
AHOH908

site_idAC8
Number of Residues4
Detailsbinding site for residue CL A 508
ChainResidue
AARG393
ATRP412
AHOH836
AHOH862

site_idAC9
Number of Residues4
Detailsbinding site for residue EPE A 509
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH636

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 510
ChainResidue
ATHR154
AGLY155
AGLU476
AHOH752

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

227344

PDB entries from 2024-11-13

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