Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P1Q

Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated dCMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 501
ChainResidue
AASP330
AASP332
AASP418
AMG502
PDA4
PDC5

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
APPV507
AHOH694
PDC5
AASP330
AASP332
AMG501

site_idAC3
Number of Residues6
Detailsbinding site for residue NA A 503
ChainResidue
ATHR241
AILE243
AVAL246
PDT3
PHOH114
PHOH115

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 504
ChainResidue
AARG393
AHOH796

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 505
ChainResidue
ASER172
AGLY174
AARG175

site_idAC6
Number of Residues3
Detailsbinding site for residue CL A 506
ChainResidue
AASN457
ASER458
TDA7

site_idAC7
Number of Residues15
Detailsbinding site for residue PPV A 507
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AMG502
AHOH605
AHOH616
AHOH653
AHOH664
AHOH694
PDC5

site_idAC8
Number of Residues4
Detailsbinding site for residue EPE A 508
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH677

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon