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6OZW

Crystal structure of the 65-kilodalton amino-terminal fragment of DNA topoisomerase I from Streptococcus mutans

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003916molecular_functionDNA topoisomerase activity
A0003917molecular_functionDNA topoisomerase type I (single strand cut, ATP-independent) activity
A0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue MG A 601
ChainResidue
AARG157
AHOH789
AHOH968

site_idAC2
Number of Residues3
Detailsbinding site for residue MG A 602
ChainResidue
AARG158
AARG162
AHOH864

site_idAC3
Number of Residues3
Detailsbinding site for residue MG A 603
ChainResidue
AARG318
AHOH833
AHOH880

site_idAC4
Number of Residues4
Detailsbinding site for residue MG A 604
ChainResidue
AILE193
AARG196
AGLU197
AHOH827

site_idAC5
Number of Residues4
Detailsbinding site for residue MG A 605
ChainResidue
AARG157
AASP161
AARG184
AHOH949

site_idAC6
Number of Residues6
Detailsbinding site for residue MG A 606
ChainResidue
AASN74
AGLY79
AGLU199
AHOH795
AHOH814
AHOH964

site_idAC7
Number of Residues6
Detailsbinding site for residue FMT A 607
ChainResidue
AASP102
AARG318
ASER489
AHOH832
AHOH866
AHOH894

site_idAC8
Number of Residues6
Detailsbinding site for residue FMT A 608
ChainResidue
AASN415
AGLY416
AHOH727
AHOH753
AHOH755
AHOH803

site_idAC9
Number of Residues4
Detailsbinding site for residue FMT A 609
ChainResidue
AARG196
ATYR471
AHOH760
AHOH829

site_idAD1
Number of Residues1
Detailsbinding site for residue FMT A 610
ChainResidue
AALA360

site_idAD2
Number of Residues2
Detailsbinding site for residue FMT A 611
ChainResidue
ALYS175
ALEU523

site_idAD3
Number of Residues6
Detailsbinding site for residue FMT A 612
ChainResidue
AASN129
ATHR315
ATYR316
AHIS361
AGLU362
AALA363

site_idAD4
Number of Residues6
Detailsbinding site for residue FMT A 613
ChainResidue
AASP212
ALYS291
ALYS382
AASP383
AGLU461
AFMT620

site_idAD5
Number of Residues4
Detailsbinding site for residue FMT A 614
ChainResidue
ALYS201
ALYS201
AHOH721
AHOH801

site_idAD6
Number of Residues6
Detailsbinding site for residue FMT A 616
ChainResidue
AGLU69
AASP152
ATRP554
AGLN555
AHOH764
AHOH957

site_idAD7
Number of Residues4
Detailsbinding site for residue FMT A 617
ChainResidue
AGLU36
AGLY40
AARG41
AHOH845

site_idAD8
Number of Residues2
Detailsbinding site for residue FMT A 618
ChainResidue
AHIS114
AASP117

site_idAD9
Number of Residues1
Detailsbinding site for residue FMT A 619
ChainResidue
APRO326

site_idAE1
Number of Residues3
Detailsbinding site for residue FMT A 620
ChainResidue
ALYS291
AGLU461
AFMT613

Functional Information from PROSITE/UniProt
site_idPS00396
Number of Residues24
DetailsTOPO_IA_1 Topoisomerase (Topo) IA-type active site signature. QqLYEgirlgsngqqglITYmRTD
ChainResidueDetails
AGLN297-ASP320

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PDB entries from 2024-07-24

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