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6OZQ

Crystal structure of Mus musculus (Mm) Endonuclease V (K155M) in complex with a 23mer RNA oligo containing an inosine after a 100 min soak in 10 mM Mn2+ and K+

Functional Information from GO Data
ChainGOidnamespacecontents
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
B0004519molecular_functionendonuclease activity
B0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 301
ChainResidue
AASP52
AASP126
AASP240
AHOH406
AHOH422
CU12

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 302
ChainResidue
AGLN46
AHOH434
BASP117
APHE42
AGLY44
ALEU45

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 303
ChainResidue
AASP39
ASER41
ASER43
BGLN112
BGLU113

site_idAC4
Number of Residues2
Detailsbinding site for residue EDO A 304
ChainResidue
AASP201
AHIS202

site_idAC5
Number of Residues3
Detailsbinding site for residue PGE A 305
ChainResidue
AGLU12
AHIS225
AHIS226

site_idAC6
Number of Residues6
Detailsbinding site for residue MN B 301
ChainResidue
BASP52
BASP126
BASP240
BHOH413
BHOH420
DU12

site_idAC7
Number of Residues5
Detailsbinding site for residue GOL B 302
ChainResidue
AASP117
BPHE42
BSER43
BGLY44
BLEU45

site_idAC8
Number of Residues2
Detailsbinding site for residue EDO B 303
ChainResidue
BASP201
BHIS202

site_idAC9
Number of Residues2
Detailsbinding site for residue MN C 101
ChainResidue
CU18
CHOH211

site_idAD1
Number of Residues3
Detailsbinding site for residue MN C 102
ChainResidue
AHOH426
CA13
CHOH210

site_idAD2
Number of Residues1
Detailsbinding site for residue MN D 101
ChainResidue
DU18

site_idAD3
Number of Residues6
Detailsbinding site for residue MN D 102
ChainResidue
BHOH401
BHOH403
BHOH441
DA13
DHOH210
DHOH213

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP52
AASP126
BASP52
BASP126

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Interaction with target DNA => ECO:0000250
ChainResidueDetails
ATYR91
BTYR91

222926

PDB entries from 2024-07-24

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