6OS5
Crystal structure of CymD prenyltransferase complexed with L-tryptophan
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0009820 | biological_process | alkaloid metabolic process |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| B | 0009820 | biological_process | alkaloid metabolic process |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| C | 0009820 | biological_process | alkaloid metabolic process |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | binding site for residue TRP A 401 |
| Chain | Residue |
| A | ASP55 |
| A | HOH542 |
| A | HOH549 |
| A | HOH617 |
| A | HOH655 |
| A | HOH705 |
| A | VAL56 |
| A | GLU64 |
| A | MET132 |
| A | PHE192 |
| A | ARG211 |
| A | TYR274 |
| A | TYR326 |
| A | BEZ402 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue BEZ A 402 |
| Chain | Residue |
| A | GLU64 |
| A | GLN77 |
| A | ALA79 |
| A | MET132 |
| A | TRP148 |
| A | TYR209 |
| A | TYR274 |
| A | TYR341 |
| A | TRP401 |
| A | HOH503 |
| site_id | AC3 |
| Number of Residues | 13 |
| Details | binding site for residue TRP B 401 |
| Chain | Residue |
| B | ASP55 |
| B | VAL56 |
| B | GLU64 |
| B | PHE192 |
| B | ARG211 |
| B | TYR274 |
| B | TYR326 |
| B | IMD403 |
| B | HOH523 |
| B | HOH546 |
| B | HOH554 |
| B | HOH659 |
| B | HOH694 |
| site_id | AC4 |
| Number of Residues | 14 |
| Details | binding site for residue DPO B 402 |
| Chain | Residue |
| B | GLN77 |
| B | LYS146 |
| B | ARG205 |
| B | LYS207 |
| B | TYR209 |
| B | TYR274 |
| B | ARG337 |
| B | LYS339 |
| B | TYR341 |
| B | IMD403 |
| B | HOH509 |
| B | HOH540 |
| B | HOH544 |
| B | HOH561 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue IMD B 403 |
| Chain | Residue |
| B | GLU64 |
| B | TRP148 |
| B | TRP401 |
| B | DPO402 |
| site_id | AC6 |
| Number of Residues | 14 |
| Details | binding site for residue DPO C 401 |
| Chain | Residue |
| C | GLN77 |
| C | LYS146 |
| C | TRP148 |
| C | ARG205 |
| C | LYS207 |
| C | TYR209 |
| C | TYR274 |
| C | ARG337 |
| C | LYS339 |
| C | TYR341 |
| C | HOH534 |
| C | HOH558 |
| C | HOH573 |
| C | HOH621 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | Active site: {"description":"Nucleophile (Probable)","evidences":[{"source":"PubMed","id":"31251043","evidenceCode":"ECO:0000303"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31251043","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6OS5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6OS6","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 27 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31251043","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"6OS6","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31251043","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6OS5","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
