6OQ5
Structure of the full-length Clostridium difficile toxin B in complex with 3 VHHs
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005576 | cellular_component | extracellular region |
A | 0005886 | cellular_component | plasma membrane |
A | 0006508 | biological_process | proteolysis |
A | 0008233 | molecular_function | peptidase activity |
A | 0008234 | molecular_function | cysteine-type peptidase activity |
A | 0008289 | molecular_function | lipid binding |
A | 0016020 | cellular_component | membrane |
A | 0016740 | molecular_function | transferase activity |
A | 0016757 | molecular_function | glycosyltransferase activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0020002 | cellular_component | host cell plasma membrane |
A | 0030430 | cellular_component | host cell cytoplasm |
A | 0033644 | cellular_component | host cell membrane |
A | 0035821 | biological_process | modulation of process of another organism |
A | 0044164 | cellular_component | host cell cytosol |
A | 0044174 | cellular_component | host cell endosome |
A | 0044175 | cellular_component | host cell endosome membrane |
A | 0046872 | molecular_function | metal ion binding |
A | 0090729 | molecular_function | toxin activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2801 |
Chain | Residue |
A | ASP547 |
A | HIS654 |
A | CYS699 |
A | HIS758 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue MG A 2802 |
Chain | Residue |
A | ASP286 |
A | ASP288 |
A | GLU516 |
A | LEU520 |