6OJW
Crystal structure of Sphingomonas paucimobilis TMY1009 holo-LsdA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0010436 | molecular_function | carotenoid dioxygenase activity |
| A | 0016121 | biological_process | carotene catabolic process |
| A | 0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| A | 0046274 | biological_process | lignin catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050054 | molecular_function | lignostilbene alpha beta-dioxygenase activity |
| A | 0051213 | molecular_function | dioxygenase activity |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0010436 | molecular_function | carotenoid dioxygenase activity |
| B | 0016121 | biological_process | carotene catabolic process |
| B | 0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| B | 0046274 | biological_process | lignin catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0050054 | molecular_function | lignostilbene alpha beta-dioxygenase activity |
| B | 0051213 | molecular_function | dioxygenase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue FE B 501 |
| Chain | Residue |
| B | HIS167 |
| B | HIS218 |
| B | HIS282 |
| B | HIS472 |
| B | HOH752 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue GOL B 502 |
| Chain | Residue |
| B | ALA127 |
| B | TYR131 |
| B | THR153 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 503 |
| Chain | Residue |
| B | ASP85 |
| B | GLU150 |
| B | GLY151 |
| B | TYR152 |
| A | ASP423 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue FE A 501 |
| Chain | Residue |
| A | HIS167 |
| A | HIS218 |
| A | HIS282 |
| A | HIS472 |
| A | HOH741 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 502 |
| Chain | Residue |
| A | TYR442 |
| A | ASP444 |
| A | LYS462 |
| A | LEU463 |
| B | ARG15 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | ALA127 |
| A | TYR131 |
| A | THR153 |
| A | PHE155 |
| A | GLY201 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| B | HIS167 | |
| B | HIS218 | |
| B | HIS282 | |
| B | HIS472 | |
| A | HIS167 | |
| A | HIS218 | |
| A | HIS282 | |
| A | HIS472 |
