Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6O4C

Structure of ALDH7A1 mutant W175A complexed with NAD

Functional Information from GO Data
ChainGOidnamespacecontents
A0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
A0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005829cellular_componentcytosol
A0006081biological_processcellular aldehyde metabolic process
A0007605biological_processsensory perception of sound
A0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
A0016491molecular_functionoxidoreductase activity
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0019285biological_processglycine betaine biosynthetic process from choline
A0042426biological_processcholine catabolic process
A0042802molecular_functionidentical protein binding
A0070062cellular_componentextracellular exosome
B0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
B0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005759cellular_componentmitochondrial matrix
B0005829cellular_componentcytosol
B0006081biological_processcellular aldehyde metabolic process
B0007605biological_processsensory perception of sound
B0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
B0016491molecular_functionoxidoreductase activity
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0019285biological_processglycine betaine biosynthetic process from choline
B0042426biological_processcholine catabolic process
B0042802molecular_functionidentical protein binding
B0070062cellular_componentextracellular exosome
C0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
C0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005737cellular_componentcytoplasm
C0005739cellular_componentmitochondrion
C0005759cellular_componentmitochondrial matrix
C0005829cellular_componentcytosol
C0006081biological_processcellular aldehyde metabolic process
C0007605biological_processsensory perception of sound
C0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
C0016491molecular_functionoxidoreductase activity
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0019285biological_processglycine betaine biosynthetic process from choline
C0042426biological_processcholine catabolic process
C0042802molecular_functionidentical protein binding
C0070062cellular_componentextracellular exosome
D0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
D0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005737cellular_componentcytoplasm
D0005739cellular_componentmitochondrion
D0005759cellular_componentmitochondrial matrix
D0005829cellular_componentcytosol
D0006081biological_processcellular aldehyde metabolic process
D0007605biological_processsensory perception of sound
D0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
D0016491molecular_functionoxidoreductase activity
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0019285biological_processglycine betaine biosynthetic process from choline
D0042426biological_processcholine catabolic process
D0042802molecular_functionidentical protein binding
D0070062cellular_componentextracellular exosome
E0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
E0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005737cellular_componentcytoplasm
E0005739cellular_componentmitochondrion
E0005759cellular_componentmitochondrial matrix
E0005829cellular_componentcytosol
E0006081biological_processcellular aldehyde metabolic process
E0007605biological_processsensory perception of sound
E0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
E0016491molecular_functionoxidoreductase activity
E0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
E0019285biological_processglycine betaine biosynthetic process from choline
E0042426biological_processcholine catabolic process
E0042802molecular_functionidentical protein binding
E0070062cellular_componentextracellular exosome
F0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
F0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005737cellular_componentcytoplasm
F0005739cellular_componentmitochondrion
F0005759cellular_componentmitochondrial matrix
F0005829cellular_componentcytosol
F0006081biological_processcellular aldehyde metabolic process
F0007605biological_processsensory perception of sound
F0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
F0016491molecular_functionoxidoreductase activity
F0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
F0019285biological_processglycine betaine biosynthetic process from choline
F0042426biological_processcholine catabolic process
F0042802molecular_functionidentical protein binding
F0070062cellular_componentextracellular exosome
G0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
G0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005737cellular_componentcytoplasm
G0005739cellular_componentmitochondrion
G0005759cellular_componentmitochondrial matrix
G0005829cellular_componentcytosol
G0006081biological_processcellular aldehyde metabolic process
G0007605biological_processsensory perception of sound
G0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
G0016491molecular_functionoxidoreductase activity
G0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
G0019285biological_processglycine betaine biosynthetic process from choline
G0042426biological_processcholine catabolic process
G0042802molecular_functionidentical protein binding
G0070062cellular_componentextracellular exosome
H0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
H0004043molecular_functionL-aminoadipate-semialdehyde dehydrogenase activity
H0005515molecular_functionprotein binding
H0005634cellular_componentnucleus
H0005737cellular_componentcytoplasm
H0005739cellular_componentmitochondrion
H0005759cellular_componentmitochondrial matrix
H0005829cellular_componentcytosol
H0006081biological_processcellular aldehyde metabolic process
H0007605biological_processsensory perception of sound
H0008802molecular_functionbetaine-aldehyde dehydrogenase (NAD+) activity
H0016491molecular_functionoxidoreductase activity
H0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
H0019285biological_processglycine betaine biosynthetic process from choline
H0042426biological_processcholine catabolic process
H0042802molecular_functionidentical protein binding
H0070062cellular_componentextracellular exosome
Functional Information from PDB Data
site_idAC1
Number of Residues33
Detailsbinding site for residue NAD A 601
ChainResidue
AILE163
AALA227
AGLY230
ATHR231
APHE244
ATHR245
AGLY246
ASER247
AVAL250
AGLU268
ALEU269
ATHR164
AGLY270
ACYS302
AGLU399
APHE401
APHE468
AHOH706
AHOH739
AHOH756
AHOH795
AHOH915
AALA165
AHOH925
AHOH973
AHOH994
AHOH1021
APHE166
AASN167
ALYS190
AGLY191
AALA192
APRO193

site_idAC2
Number of Residues3
Detailsbinding site for residue PGE A 602
ChainResidue
AGLU121
APHE468
AGLU479

site_idAC3
Number of Residues4
Detailsbinding site for residue 1PE A 603
ChainResidue
AARG68
ATRP71
AASN240
AHOH721

site_idAC4
Number of Residues4
Detailsbinding site for residue CL A 604
ChainResidue
APHE510
AGLN511
BVAL287
BARG321

site_idAC5
Number of Residues2
Detailsbinding site for residue CL A 605
ChainResidue
AARG321
BGLN511

site_idAC6
Number of Residues34
Detailsbinding site for residue NAD B 601
ChainResidue
BILE163
BTHR164
BALA165
BPHE166
BASN167
BLYS190
BGLY191
BALA192
BPRO193
BALA227
BGLY230
BTHR231
BPHE244
BTHR245
BGLY246
BSER247
BVAL250
BVAL254
BGLU268
BLEU269
BGLY270
BCYS302
BGLU399
BPHE401
BPHE468
BMG604
BHOH712
BHOH716
BHOH830
BHOH839
BHOH955
BHOH966
BHOH972
BHOH993

site_idAC7
Number of Residues2
Detailsbinding site for residue PGE B 602
ChainResidue
BGLU121
BILE464

site_idAC8
Number of Residues5
Detailsbinding site for residue 1PE B 603
ChainResidue
BARG68
BTRP71
BGLU237
BASN240
BHOH780

site_idAC9
Number of Residues5
Detailsbinding site for residue MG B 604
ChainResidue
BNAD601
BHOH966
BHOH972
BHOH993
BHOH1004

site_idAD1
Number of Residues33
Detailsbinding site for residue NAD C 601
ChainResidue
CALA192
CPRO193
CALA227
CGLY230
CTHR231
CPHE244
CTHR245
CGLY246
CSER247
CVAL250
CVAL254
CGLU268
CLEU269
CGLY270
CCYS302
CGLU399
CPHE401
CPHE468
CHOH713
CHOH722
CHOH782
CHOH805
CHOH898
CHOH979
CHOH999
CHOH1016
CILE163
CTHR164
CALA165
CPHE166
CASN167
CLYS190
CGLY191

site_idAD2
Number of Residues2
Detailsbinding site for residue PGE C 602
ChainResidue
CGLU121
CGLU479

site_idAD3
Number of Residues6
Detailsbinding site for residue 1PE C 603
ChainResidue
CARG68
CTRP71
CGLU237
CARG238
CASN240
CHOH708

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO C 604
ChainResidue
CTRP13
CSER102
CHOH959

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO C 605
ChainResidue
CTYR326
CILE329
CTYR369
CPRO383

site_idAD6
Number of Residues30
Detailsbinding site for residue NAD D 601
ChainResidue
DILE163
DTHR164
DALA165
DPHE166
DASN167
DLYS190
DGLY191
DALA192
DPRO193
DALA227
DGLY230
DTHR231
DPHE244
DTHR245
DGLY246
DSER247
DVAL250
DVAL254
DGLU268
DLEU269
DGLY270
DCYS302
DGLU399
DPHE401
DPHE468
DHOH706
DHOH737
DHOH755
DHOH763
DHOH1004

site_idAD7
Number of Residues2
Detailsbinding site for residue PGE D 602
ChainResidue
DGLU121
DGLU479

site_idAD8
Number of Residues5
Detailsbinding site for residue 1PE D 603
ChainResidue
DARG68
DTRP71
DVAL157
DGLU237
DASN240

site_idAD9
Number of Residues4
Detailsbinding site for residue EDO D 604
ChainResidue
BTYR498
DARG441
DHOH910
DHOH914

site_idAE1
Number of Residues2
Detailsbinding site for residue CL D 605
ChainResidue
CGLN511
DARG321

site_idAE2
Number of Residues4
Detailsbinding site for residue CL D 606
ChainResidue
CVAL287
CARG321
CHOH783
DGLN511

site_idAE3
Number of Residues34
Detailsbinding site for residue NAD E 601
ChainResidue
EILE163
ETHR164
EALA165
EPHE166
EASN167
ELYS190
EGLY191
EALA192
EPRO193
EALA227
EGLY230
ETHR231
EPHE244
ETHR245
EGLY246
ESER247
EVAL250
EGLU268
ELEU269
EGLY270
ECYS302
EGLU399
EPHE401
EPHE468
EMG607
EHOH720
EHOH811
EHOH842
EHOH906
EHOH927
EHOH936
EHOH965
EHOH1022
EHOH1034

site_idAE4
Number of Residues3
Detailsbinding site for residue PGE E 602
ChainResidue
EGLU121
EPHE468
EGLU479

site_idAE5
Number of Residues5
Detailsbinding site for residue PEG E 603
ChainResidue
ETYR326
EILE329
ETYR369
EPRO383
EHOH748

site_idAE6
Number of Residues6
Detailsbinding site for residue 1PE E 604
ChainResidue
EARG68
EGLU69
ETRP71
EGLU237
EASN240
EHOH724

site_idAE7
Number of Residues4
Detailsbinding site for residue CL E 605
ChainResidue
EGLN511
FVAL287
FARG321
FHOH785

site_idAE8
Number of Residues4
Detailsbinding site for residue CL E 606
ChainResidue
EVAL287
EARG321
FPHE510
FGLN511

site_idAE9
Number of Residues3
Detailsbinding site for residue MG E 607
ChainResidue
ENAD601
EHOH906
EHOH1022

site_idAF1
Number of Residues32
Detailsbinding site for residue NAD F 601
ChainResidue
FILE163
FTHR164
FALA165
FPHE166
FASN167
FLYS190
FGLY191
FALA192
FPRO193
FALA227
FGLY230
FTHR231
FPHE244
FTHR245
FGLY246
FSER247
FVAL250
FGLU268
FLEU269
FGLY270
FCYS302
FGLU399
FPHE401
FPHE468
FMG605
FHOH712
FHOH714
FHOH830
FHOH837
FHOH937
FHOH983
FHOH1007

site_idAF2
Number of Residues4
Detailsbinding site for residue PGE F 602
ChainResidue
FGLU121
FILE464
FPHE468
FGLU479

site_idAF3
Number of Residues5
Detailsbinding site for residue 1PE F 603
ChainResidue
FARG68
FTRP71
FGLU237
FARG238
FASN240

site_idAF4
Number of Residues5
Detailsbinding site for residue EDO F 604
ChainResidue
FTYR128
FLEU132
FSER482
FHOH745
FHOH977

site_idAF5
Number of Residues4
Detailsbinding site for residue MG F 605
ChainResidue
FNAD601
FHOH937
FHOH983
FHOH1007

site_idAF6
Number of Residues30
Detailsbinding site for residue NAD G 601
ChainResidue
GILE163
GTHR164
GALA165
GPHE166
GASN167
GLYS190
GGLY191
GALA192
GPRO193
GALA227
GGLY230
GTHR231
GPHE244
GTHR245
GGLY246
GSER247
GVAL250
GGLU268
GLEU269
GGLY270
GCYS302
GGLU399
GPHE401
GPHE468
GHOH703
GHOH734
GHOH749
GHOH866
GHOH954
GHOH1011

site_idAF7
Number of Residues3
Detailsbinding site for residue PGE G 602
ChainResidue
GCYS302
GPHE468
GGLU479

site_idAF8
Number of Residues7
Detailsbinding site for residue 1PE G 603
ChainResidue
GARG68
GGLU69
GTRP71
GGLU237
GASN240
GHOH893
GHOH998

site_idAF9
Number of Residues3
Detailsbinding site for residue EDO G 604
ChainResidue
GTRP13
GSER102
GHOH752

site_idAG1
Number of Residues6
Detailsbinding site for residue EDO G 605
ChainResidue
GTYR326
GILE329
GVAL331
GTYR369
GPRO383
GHOH993

site_idAG2
Number of Residues4
Detailsbinding site for residue CL G 606
ChainResidue
GGLN511
HVAL287
HARG321
HHOH818

site_idAG3
Number of Residues3
Detailsbinding site for residue CL G 607
ChainResidue
GARG321
GHOH775
HGLN511

site_idAG4
Number of Residues29
Detailsbinding site for residue NAD H 601
ChainResidue
HILE163
HTHR164
HALA165
HPHE166
HASN167
HLYS190
HGLY191
HALA192
HPRO193
HALA227
HGLY230
HTHR231
HPHE244
HTHR245
HGLY246
HSER247
HVAL250
HGLU268
HLEU269
HGLY270
HCYS302
HGLU399
HPHE401
HPHE468
HHOH705
HHOH721
HHOH758
HHOH810
HHOH892

site_idAG5
Number of Residues5
Detailsbinding site for residue PG4 H 602
ChainResidue
HGLU121
HTHR303
HSER460
HPHE468
HGLU479

site_idAG6
Number of Residues9
Detailsbinding site for residue PGE H 603
ChainResidue
BGLY29
BSER30
BLYS66
HTYR326
HILE329
HVAL331
HTYR369
HHOH716
HHOH923

site_idAG7
Number of Residues4
Detailsbinding site for residue 1PE H 604
ChainResidue
HARG68
HTRP71
HGLU237
HASN240

site_idAG8
Number of Residues3
Detailsbinding site for residue EDO H 605
ChainResidue
HTRP13
HSER102
HHOH959

Functional Information from PROSITE/UniProt
site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. LELGGNNA
ChainResidueDetails
ALEU267-ALA274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10007
ChainResidueDetails
AGLU268
BGLU268
CGLU268
DGLU268
EGLU268
FGLU268
GGLU268
HGLU268

site_idSWS_FT_FI2
Number of Residues8
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:26260980
ChainResidueDetails
ACYS302
BCYS302
CCYS302
DCYS302
ECYS302
FCYS302
GCYS302
HCYS302

site_idSWS_FT_FI3
Number of Residues32
DetailsBINDING: BINDING => ECO:0000269|PubMed:20207735, ECO:0000269|PubMed:26260980, ECO:0007744|PDB:2J6L, ECO:0007744|PDB:4X0T, ECO:0007744|PDB:4ZUK, ECO:0007744|PDB:4ZVY
ChainResidueDetails
ATHR164
CLYS190
CGLY230
CGLY246
DTHR164
DLYS190
DGLY230
DGLY246
ETHR164
ELYS190
EGLY230
ALYS190
EGLY246
FTHR164
FLYS190
FGLY230
FGLY246
GTHR164
GLYS190
GGLY230
GGLY246
HTHR164
AGLY230
HLYS190
HGLY230
HGLY246
AGLY246
BTHR164
BLYS190
BGLY230
BGLY246
CTHR164

site_idSWS_FT_FI4
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:20207735, ECO:0000269|PubMed:26260980, ECO:0007744|PDB:2J6L, ECO:0007744|PDB:4X0T
ChainResidueDetails
AGLU268
EGLU399
FGLU268
FGLU399
GGLU268
GGLU399
HGLU268
HGLU399
AGLU399
BGLU268
BGLU399
CGLU268
CGLU399
DGLU268
DGLU399
EGLU268

site_idSWS_FT_FI5
Number of Residues24
DetailsBINDING: BINDING => ECO:0007744|PDB:4ZUL
ChainResidueDetails
ATHR303
DTHR303
DGLY461
DALA462
ETHR303
EGLY461
EALA462
FTHR303
FGLY461
FALA462
GTHR303
AGLY461
GGLY461
GALA462
HTHR303
HGLY461
HALA462
AALA462
BTHR303
BGLY461
BALA462
CTHR303
CGLY461
CALA462

site_idSWS_FT_FI6
Number of Residues8
DetailsSITE: Transition state stabilizer => ECO:0000250
ChainResidueDetails
AASN167
BASN167
CASN167
DASN167
EASN167
FASN167
GASN167
HASN167

site_idSWS_FT_FI7
Number of Residues8
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q9DBF1
ChainResidueDetails
ALYS66
BLYS66
CLYS66
DLYS66
ELYS66
FLYS66
GLYS66
HLYS66

site_idSWS_FT_FI8
Number of Residues16
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q9DBF1
ChainResidueDetails
ALYS434
ELYS472
FLYS434
FLYS472
GLYS434
GLYS472
HLYS434
HLYS472
ALYS472
BLYS434
BLYS472
CLYS434
CLYS472
DLYS434
DLYS472
ELYS434

site_idSWS_FT_FI9
Number of Residues8
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q9DBF1
ChainResidueDetails
ALYS509
BLYS509
CLYS509
DLYS509
ELYS509
FLYS509
GLYS509
HLYS509

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon