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6O42

Crystal structure of the germline PGZL1 (PGZL1_gVmDmJ) Fab in complex with MPER peptide epitope.

Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue GOL L 301
ChainResidue
HPRO175
HSER186
HLEU187
HSER188
LGLN160
LSER162
LSER176
LSER177
LTHR178

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL H 301
ChainResidue
GTRP672
HILE52
HTHR56
HALA57
IILE682

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL H 302
ChainResidue
HLEU4
HVAL5
HGLN105

site_idAC4
Number of Residues6
Detailsbinding site for residue SO4 H 303
ChainResidue
ASER121
AASP122
AGLU123
BPRO123
BLYS228
HLYS218

site_idAC5
Number of Residues3
Detailsbinding site for residue GOL A 301
ChainResidue
AGLY57
AASP60
ATHR93

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
ChainResidueDetails
LTYR192-HIS198
HTYR206-HIS212

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083
ChainResidueDetails
GASP674
IASP674

220472

PDB entries from 2024-05-29

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