Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6O3D

Crystal structure of the unbound Fab fragment of the human HIV-1 neutralizing antibody PGZL1.

Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue GOL L 301
ChainResidue
LSER65
LARG211
LHOH411

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL L 302
ChainResidue
LHOH439
LARG45
LPRO59
LARG61
LGLU81
LHOH402
LHOH405

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL L 303
ChainResidue
HASP72
HTHR75
HHOH406
LGLY200
LSER202
LGOL304

site_idAC4
Number of Residues8
Detailsbinding site for residue GOL L 304
ChainResidue
HSER74
HTHR75
HHOH406
LALA111
LALA112
LGLY200
LGOL303
LHOH420

site_idAC5
Number of Residues14
Detailsbinding site for residue GOL L 305
ChainResidue
HPHE174
HPRO175
HVAL177
HSER186
HLEU187
HSER188
LGLN160
LGLU161
LSER162
LSER176
LSER177
LTHR178
LHOH421
LHOH426

site_idAC6
Number of Residues6
Detailsbinding site for residue GOL L 306
ChainResidue
HLYS228
LSER121
LASP122
LGLU123
LHOH401
LHOH564

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 H 301
ChainResidue
HPHE29
HSER30
HHOH427

site_idAC8
Number of Residues8
Detailsbinding site for residue GOL H 302
ChainResidue
HHIS172
HHOH424
HHOH522
LTHR164
LGLU165
LGLN166
LASP167
LHOH459

site_idAC9
Number of Residues9
Detailsbinding site for residue GOL H 303
ChainResidue
HSER7
HGLY8
HGLY9
HGLU10
HSER115
HTHR116
HHOH435
HHOH436
HHOH629

site_idAD1
Number of Residues7
Detailsbinding site for residue GOL H 304
ChainResidue
HGLU10
HVAL108
HTHR110
HPRO149
HGLU150
HHOH459
HHOH573

site_idAD2
Number of Residues7
Detailsbinding site for residue GOL H 305
ChainResidue
HGLY98
HTRP99
HLYS100
HLEU100
HHOH411
LTYR49
LLYS126

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
HTYR206-HIS212
LTYR192-HIS198

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon