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6O22

Structure of Asf1-H3:H4-Rtt109-Vps75 histone chaperone-lysine acetyltransferase complex with the histone substrate.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000785cellular_componentchromatin
A0003682molecular_functionchromatin binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005829cellular_componentcytosol
A0006303biological_processdouble-strand break repair via nonhomologous end joining
A0006334biological_processnucleosome assembly
A0010698molecular_functionacetyltransferase activator activity
A0015031biological_processprotein transport
A0036211biological_processprotein modification process
A0042393molecular_functionhistone binding
A0042802molecular_functionidentical protein binding
A0070775cellular_componentH3 histone acetyltransferase complex
A2000617biological_processobsolete positive regulation of histone H3-K9 acetylation
B0000785cellular_componentchromatin
B0003682molecular_functionchromatin binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005829cellular_componentcytosol
B0006303biological_processdouble-strand break repair via nonhomologous end joining
B0006334biological_processnucleosome assembly
B0010698molecular_functionacetyltransferase activator activity
B0015031biological_processprotein transport
B0036211biological_processprotein modification process
B0042393molecular_functionhistone binding
B0042802molecular_functionidentical protein binding
B0070775cellular_componentH3 histone acetyltransferase complex
B2000617biological_processobsolete positive regulation of histone H3-K9 acetylation
C0000785cellular_componentchromatin
C0004402molecular_functionhistone acetyltransferase activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0006334biological_processnucleosome assembly
C0006357biological_processregulation of transcription by RNA polymerase II
C0006974biological_processDNA damage response
C0010468biological_processregulation of gene expression
C0010484molecular_functionhistone H3 acetyltransferase activity
C0010526biological_processretrotransposon silencing
C0016740molecular_functiontransferase activity
C0032931molecular_functionhistone H3K56 acetyltransferase activity
C0036211biological_processprotein modification process
C0036408molecular_functionhistone H3K14 acetyltransferase activity
C0043007biological_processmaintenance of rDNA
C0043992molecular_functionhistone H3K9 acetyltransferase activity
C0043994molecular_functionhistone H3K23 acetyltransferase activity
C0044017molecular_functionhistone H3K27 acetyltransferase activity
C0061733molecular_functionpeptide-lysine-N-acetyltransferase activity
C0070775cellular_componentH3 histone acetyltransferase complex
C1990414biological_processreplication-born double-strand break repair via sister chromatid exchange
C2001032biological_processregulation of double-strand break repair via nonhomologous end joining
D0000781cellular_componentchromosome, telomeric region
D0000785cellular_componentchromatin
D0001932biological_processregulation of protein phosphorylation
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005829cellular_componentcytosol
D0006282biological_processregulation of DNA repair
D0006325biological_processchromatin organization
D0006335biological_processDNA replication-dependent chromatin assembly
D0006337biological_processnucleosome disassembly
D0006357biological_processregulation of transcription by RNA polymerase II
D0010468biological_processregulation of gene expression
D0010698molecular_functionacetyltransferase activator activity
D0030466biological_processsilent mating-type cassette heterochromatin formation
D0031509biological_processsubtelomeric heterochromatin formation
D0032968biological_processpositive regulation of transcription elongation by RNA polymerase II
D0036211biological_processprotein modification process
D0042393molecular_functionhistone binding
D0070775cellular_componentH3 histone acetyltransferase complex
D2000002biological_processnegative regulation of DNA damage checkpoint
E0000786cellular_componentnucleosome
E0003677molecular_functionDNA binding
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005694cellular_componentchromosome
F0000786cellular_componentnucleosome
F0003677molecular_functionDNA binding
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005694cellular_componentchromosome
F0006334biological_processnucleosome assembly
Functional Information from PROSITE/UniProt
site_idPS00047
Number of Residues5
DetailsHISTONE_H4 Histone H4 signature. GAKRH
ChainResidueDetails
FGLY14-HIS18

site_idPS00322
Number of Residues7
DetailsHISTONE_H3_1 Histone H3 signature 1. KAPRKQL
ChainResidueDetails
ELYS14-LEU20

site_idPS00959
Number of Residues9
DetailsHISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
ChainResidueDetails
EPRO66-ILE74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsDNA_BIND:
ChainResidueDetails
FLYS16-LYS20
EARG17

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FSER1
CARG97
CHIS211

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Symmetric dimethylarginine; by PRMT5 and PRMT7; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FARG3

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-lactoyllysine; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS5

site_idSWS_FT_FI5
Number of Residues4
DetailsMOD_RES: N6-propionyllysine; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS8
FLYS16
FLYS44
FLYS79

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS12
FLYS20

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS31
FLYS91

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PAK2 => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FSER47

site_idSWS_FT_FI9
Number of Residues2
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FTYR51
FTYR88

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS59
ELYS23
ELYS27
ELYS36
ELYS64

site_idSWS_FT_FI11
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS77

site_idSWS_FT_FI12
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
FLYS31

site_idSWS_FT_FI13
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62805
ChainResidueDetails
ELYS37
FLYS91

site_idSWS_FT_FI14
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ETYR41

site_idSWS_FT_FI15
Number of Residues2
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
ChainResidueDetails
ELYS56
ELYS79

site_idSWS_FT_FI16
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ESER57

site_idSWS_FT_FI17
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ETHR80
ETHR107

site_idSWS_FT_FI18
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P84243
ChainResidueDetails
ESER86

site_idSWS_FT_FI19
Number of Residues1
DetailsMOD_RES: N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ELYS115

site_idSWS_FT_FI20
Number of Residues1
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ELYS122

site_idSWS_FT_FI21
Number of Residues1
DetailsLIPID: S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ECYS110

221716

PDB entries from 2024-06-26

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