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6NXG

Crystal structure of glycylpeptide N-tetradecanoyltransferase from Plasmodium vivax in complex with inhibitor 303a

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0006499biological_processN-terminal protein myristoylation
A0016746molecular_functionacyltransferase activity
A0046872molecular_functionmetal ion binding
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0006499biological_processN-terminal protein myristoylation
B0016746molecular_functionacyltransferase activity
B0046872molecular_functionmetal ion binding
C0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
C0006499biological_processN-terminal protein myristoylation
C0016746molecular_functionacyltransferase activity
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 501
ChainResidue
ALEU169
ASER171
ALYS172
AARG173
ALEU174
AMYA505

site_idAC2
Number of Residues5
Detailsbinding site for residue CL A 502
ChainResidue
AARG358
AHOH685
ALYS180
ATHR247
ALEU248

site_idAC3
Number of Residues6
Detailsbinding site for residue OXM A 503
ChainResidue
AILE52
AASN55
AASN187
ATRP192
ALYS251
AASN394

site_idAC4
Number of Residues16
Detailsbinding site for residue L7Y A 504
ChainResidue
AVAL96
AGLU97
AASP98
APHE105
ATYR211
AHIS213
ALEU330
ATYR334
AASN365
AALA366
ALEU367
AHOH663
AHOH714
AHOH726
AHOH806
AHOH953

site_idAC5
Number of Residues38
Detailsbinding site for residue MYA A 505
ChainResidue
ATYR28
ALYS29
APHE30
ATRP31
AASN94
ATYR95
AVAL96
AASN161
APHE162
ALEU163
ACYS164
AVAL165
AARG170
ASER171
ALYS172
AARG173
ALEU174
AALA175
APRO176
ATHR183
AASN187
ATRP192
AGLN193
ATYR196
ATHR197
ALEU202
ATYR393
AMG501
AHOH666
AHOH678
AHOH691
AHOH736
AHOH770
AHOH801
AHOH812
AHOH895
AHOH994
AHOH1029

site_idAC6
Number of Residues8
Detailsbinding site for residue BME A 506
ChainResidue
AGLU159
ATRP289
AVAL408
ALEU409
ALEU410
AHOH655
AHOH787
AHOH841

site_idAC7
Number of Residues6
Detailsbinding site for residue MG B 501
ChainResidue
BLEU169
BSER171
BLYS172
BARG173
BLEU174
BMYA504

site_idAC8
Number of Residues5
Detailsbinding site for residue CL B 502
ChainResidue
BLYS180
BTHR247
BLEU248
BARG358
BHOH672

site_idAC9
Number of Residues18
Detailsbinding site for residue L7Y B 503
ChainResidue
BASN365
BALA366
BLEU388
BEDO505
BHOH665
BHOH759
BHOH795
BHOH905
BHOH921
BVAL96
BGLU97
BASP98
BPHE105
BTYR211
BHIS213
BPHE226
BLEU330
BTYR334

site_idAD1
Number of Residues37
Detailsbinding site for residue MYA B 504
ChainResidue
BTYR28
BLYS29
BPHE30
BTRP31
BASN94
BTYR95
BVAL96
BPHE162
BLEU163
BCYS164
BVAL165
BARG170
BSER171
BLYS172
BARG173
BLEU174
BALA175
BPRO176
BTHR183
BTRP192
BGLN193
BALA194
BTHR197
BLEU202
BTYR393
BMG501
BHOH643
BHOH700
BHOH701
BHOH710
BHOH743
BHOH767
BHOH811
BHOH830
BHOH949
BHOH951
BHOH1008

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO B 505
ChainResidue
BTYR107
BTYR315
BLEU317
BLEU410
BL7Y503
BHOH662
BHOH686

site_idAD3
Number of Residues7
Detailsbinding site for residue BME B 506
ChainResidue
BGLU159
BTRP289
BVAL408
BLEU409
BLEU410
BHOH639
BHOH911

site_idAD4
Number of Residues37
Detailsbinding site for residue MYA C 501
ChainResidue
CTYR28
CLYS29
CPHE30
CTRP31
CASN94
CTYR95
CVAL96
CPHE162
CLEU163
CCYS164
CVAL165
CARG170
CSER171
CLYS172
CARG173
CLEU174
CALA175
CPRO176
CTHR183
CASN187
CTRP192
CTYR196
CTHR197
CLEU202
CTYR393
CMG504
CHOH645
CHOH652
CHOH655
CHOH688
CHOH697
CHOH758
CHOH822
CHOH842
CHOH856
CHOH966
CHOH971

site_idAD5
Number of Residues8
Detailsbinding site for residue BME C 502
ChainResidue
CGLU159
CTRP289
CVAL408
CLEU409
CLEU410
CHOH614
CHOH734
CHOH915

site_idAD6
Number of Residues5
Detailsbinding site for residue CL C 503
ChainResidue
CLYS180
CTHR247
CLEU248
CARG358
CHOH636

site_idAD7
Number of Residues6
Detailsbinding site for residue MG C 504
ChainResidue
CLEU169
CSER171
CLYS172
CARG173
CLEU174
CMYA501

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EVNFLCvHK
ChainResidueDetails
AGLU159-LYS167

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGeGDG
ChainResidueDetails
ALYS380-GLY386

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PDB entries from 2024-07-24

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