6NWR
Thioester acyl-intermediate of Apolipoprotein N-acyltransferase (Lnt)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005515 | molecular_function | protein binding |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0016020 | cellular_component | membrane |
| A | 0016410 | molecular_function | N-acyltransferase activity |
| A | 0016746 | molecular_function | acyltransferase activity |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0042158 | biological_process | lipoprotein biosynthetic process |
| B | 0005515 | molecular_function | protein binding |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0016020 | cellular_component | membrane |
| B | 0016410 | molecular_function | N-acyltransferase activity |
| B | 0016746 | molecular_function | acyltransferase activity |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0042158 | biological_process | lipoprotein biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue LMT A 601 |
| Chain | Residue |
| A | ASN73 |
| A | TYR76 |
| A | VAL77 |
| A | LYS418 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue LMT B 601 |
| Chain | Residue |
| B | TRP141 |
| B | VAL142 |
| B | LEU143 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue D12 B 603 |
| Chain | Residue |
| B | ASN488 |
| B | GLY140 |
| B | TRP141 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 18 |
| Details | TOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614 |
| Chain | Residue | Details |
| B | MET1-ARG9 | |
| B | PHE49-ARG52 | |
| B | PRO117-THR120 | |
| B | ARG190-ASN191 | |
| B | GLN509-LYS512 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 153 |
| Details | TRANSMEM: Helical => ECO:0000269|PubMed:28675161 |
| Chain | Residue | Details |
| B | GLN10-ALA27 | |
| B | TRP34-THR48 | |
| B | PRO53-PHE68 | |
| B | GLY87-TRP116 | |
| B | TRP121-TRP141 | |
| B | VAL169-LYS189 | |
| B | TRP192-TYR210 | |
| B | ASN488-ARG508 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 324 |
| Details | TOPO_DOM: Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614 |
| Chain | Residue | Details |
| B | PHE28-VAL33 | |
| B | GLY69-PRO86 | |
| B | VAL142-GLY168 | |
| B | ILE211-GLY487 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | ACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161 |
| Chain | Residue | Details |
| B | GLU267 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | ACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161 |
| Chain | Residue | Details |
| B | LYS335 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | ACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161 |
| Chain | Residue | Details |
| B | P1L387 |
