6NWR
Thioester acyl-intermediate of Apolipoprotein N-acyltransferase (Lnt)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.164, 136.989, 220.890 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.469 - 3.500 |
R-factor | 0.26 |
Rwork | 0.259 |
R-free | 0.27490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n6l |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.470 | 48.470 | 3.710 |
High resolution limit [Å] | 3.500 | 10.500 | 3.500 |
Rmerge | 0.277 | 0.090 | 2.358 |
Number of reflections | 28448 | 1169 | 4508 |
<I/σ(I)> | 5.1 | ||
Completeness [%] | 99.9 | 99 | 100 |
Redundancy | 7.4 | 6.7 | 7.2 |
CC(1/2) | 0.996 | 0.997 | 0.433 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.4 | 292 | 25 % PEG 2000MME, 100 mM Na cacodylate, 40 mM MgCl2 |