6NCW
Crystal structure of a GH2 beta-galacturonidase from Eisenbergiella tayi bound to glycerol
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
A | 0004566 | molecular_function | beta-glucuronidase activity |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
B | 0004566 | molecular_function | beta-glucuronidase activity |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
C | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
C | 0004566 | molecular_function | beta-glucuronidase activity |
C | 0005975 | biological_process | carbohydrate metabolic process |
C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
D | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
D | 0004566 | molecular_function | beta-glucuronidase activity |
D | 0005975 | biological_process | carbohydrate metabolic process |
D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | binding site for residue CL A 601 |
Chain | Residue |
A | TRP482 |
A | ASN531 |
A | LYS532 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue GOL A 602 |
Chain | Residue |
A | HOH701 |
A | HOH706 |
A | HOH730 |
A | ARG337 |
A | GLU378 |
A | TYR430 |
A | TYR434 |
A | ARG525 |
A | GOL603 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue GOL A 603 |
Chain | Residue |
A | ASP131 |
A | HIS312 |
A | ARG337 |
A | ASN377 |
A | GLU378 |
A | ASN428 |
A | GLU465 |
A | TRP510 |
A | GOL602 |
A | HOH701 |
A | HOH752 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue CL B 601 |
Chain | Residue |
B | TRP482 |
B | ASN531 |
B | LYS532 |
site_id | AC5 |
Number of Residues | 10 |
Details | binding site for residue GOL B 602 |
Chain | Residue |
B | ASP131 |
B | HIS312 |
B | ARG337 |
B | ASN377 |
B | GLU378 |
B | ASN428 |
B | GLU465 |
B | TRP510 |
B | GOL603 |
B | HOH762 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue GOL B 603 |
Chain | Residue |
B | ARG337 |
B | GLU378 |
B | TYR430 |
B | TYR434 |
B | ARG525 |
B | GOL602 |
B | HOH708 |
B | HOH753 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue GOL B 604 |
Chain | Residue |
B | HIS156 |
B | LYS169 |
B | GLU171 |
B | TYR365 |
B | TYR403 |
B | HOH733 |
B | HOH737 |
site_id | AC8 |
Number of Residues | 7 |
Details | binding site for residue GOL B 605 |
Chain | Residue |
B | PHE157 |
B | PRO159 |
B | VAL251 |
B | GLY252 |
B | ARG254 |
B | ASN366 |
B | ARG404 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue CL C 601 |
Chain | Residue |
C | TRP482 |
C | ASN531 |
C | LYS532 |
site_id | AD1 |
Number of Residues | 10 |
Details | binding site for residue GOL C 602 |
Chain | Residue |
C | ASP131 |
C | HIS312 |
C | ARG337 |
C | ASN377 |
C | GLU378 |
C | ASN428 |
C | GLU465 |
C | TRP510 |
C | GOL603 |
C | HOH835 |
site_id | AD2 |
Number of Residues | 8 |
Details | binding site for residue GOL C 603 |
Chain | Residue |
C | ARG337 |
C | GLU378 |
C | TYR430 |
C | TYR434 |
C | ARG525 |
C | GOL602 |
C | HOH714 |
C | HOH829 |
site_id | AD3 |
Number of Residues | 3 |
Details | binding site for residue CL D 601 |
Chain | Residue |
D | TRP482 |
D | ASN531 |
D | LYS532 |
site_id | AD4 |
Number of Residues | 10 |
Details | binding site for residue GOL D 602 |
Chain | Residue |
D | ASP131 |
D | HIS312 |
D | ARG337 |
D | ASN377 |
D | GLU378 |
D | ASN428 |
D | GLU465 |
D | TRP510 |
D | GOL603 |
D | HOH820 |
site_id | AD5 |
Number of Residues | 8 |
Details | binding site for residue GOL D 603 |
Chain | Residue |
D | HOH857 |
D | ARG337 |
D | GLU378 |
D | TYR430 |
D | TYR434 |
D | ARG525 |
D | GOL602 |
D | HOH729 |