Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
B | 0003824 | molecular_function | catalytic activity |
B | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 19 |
Details | binding site for Di-peptide PLP A 501 and LYS A 502 |
Chain | Residue |
A | LYS77 |
A | TYR335 |
A | TYR392 |
A | HOH620 |
A | HOH632 |
A | HOH671 |
A | HOH719 |
A | HOH744 |
B | CYS363 |
B | GLU364 |
B | TYR400 |
A | HIS216 |
A | SER219 |
A | GLY256 |
A | GLU292 |
A | PRO293 |
A | GLY294 |
A | ARG295 |
A | ARG331 |
site_id | AC2 |
Number of Residues | 19 |
Details | binding site for Di-peptide PLP B 501 and LYS B 502 |
Chain | Residue |
A | CYS363 |
A | GLU364 |
A | TYR400 |
B | ALA75 |
B | LYS77 |
B | HIS216 |
B | SER219 |
B | GLY256 |
B | GLU292 |
B | PRO293 |
B | GLY294 |
B | ARG295 |
B | ARG331 |
B | TYR335 |
B | TYR392 |
B | HOH648 |
B | HOH664 |
B | HOH671 |
B | HOH808 |
Functional Information from PROSITE/UniProt
site_id | PS00878 |
Number of Residues | 19 |
Details | ODR_DC_2_1 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. YAiKANnnlkILehLrslG |
Chain | Residue | Details |
A | TYR74-GLY92 | |
site_id | PS00879 |
Number of Residues | 14 |
Details | ODR_DC_2_2 Orn/DAP/Arg decarboxylases family 2 signature 2. Gfe....VsYLNIGGGLG |
Chain | Residue | Details |
A | GLY245-GLY258 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000255 |
Chain | Residue | Details |
A | CYS363 | |
B | CYS363 | |
site_id | SWS_FT_FI2 |
Number of Residues | 14 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | GLY256 | |
B | ARG295 | |
B | ARG331 | |
B | TYR335 | |
B | GLU364 | |
B | TYR392 | |
A | GLU292 | |
A | ARG295 | |
A | ARG331 | |
A | TYR335 | |
A | GLU364 | |
A | TYR392 | |
B | GLY256 | |
B | GLU292 | |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000250 |
Chain | Residue | Details |
A | LYS77 | |
B | LYS77 | |