Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MFM

Structure of thiamine-monophosphate kinase from Acinetobacter baumannii in complex with adenosine diphosphate (ADP) and thiamine diphosphate (TPP), orthorhombic crystal form

Replaces:  5D9U
Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005524molecular_functionATP binding
A0009030molecular_functionthiamine-phosphate kinase activity
A0009228biological_processthiamine biosynthetic process
A0009229biological_processthiamine diphosphate biosynthetic process
A0016301molecular_functionkinase activity
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0005524molecular_functionATP binding
B0009030molecular_functionthiamine-phosphate kinase activity
B0009228biological_processthiamine biosynthetic process
B0009229biological_processthiamine diphosphate biosynthetic process
B0016301molecular_functionkinase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues28
Detailsbinding site for residue TPP A 401
ChainResidue
AASP43
AASP201
AGLY246
AASP248
ATYR250
ATYR301
AHIS303
AMG402
AMG403
AMG405
AHOH524
AGLY48
AHOH527
AHOH540
AHOH635
BASP118
BADP401
BNA402
BHOH509
BHOH548
BHOH587
AARG49
AHIS50
APHE51
APRO52
ALEU165
ALEU176
ASER200

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 402
ChainResidue
AASP43
AASP71
ATPP401
AHOH540
AHOH635
BADP401

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 403
ChainResidue
AASP201
ATPP401
BHOH506
BHOH509
BHOH548

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 404
ChainResidue
AASP71
AASP198
AHOH533
AHOH635
BASP26
BADP401

site_idAC5
Number of Residues7
Detailsbinding site for residue MG A 405
ChainResidue
AASP43
ATPP401
ANA409
BASP118
BADP401
BNA402
BHOH571

site_idAC6
Number of Residues30
Detailsbinding site for residue ADP A 406
ChainResidue
AILE7
APHE11
AILE23
AGLY24
AASP25
AASP26
ALEU84
AGLY116
AGLY117
AASP118
ATHR119
AMG408
AHOH507
AHOH519
AHOH551
AHOH558
AHOH567
AHOH626
BASP43
BASP71
BARG143
BSER200
BNA403
BTPP404
BMG405
BMG407
BHOH515
BHOH521
BHOH617
BHOH624

site_idAC7
Number of Residues7
Detailsbinding site for residue NA A 407
ChainResidue
AASP118
ATHR120
AMG408
AHOH613
BASP43
BTPP404
BHOH610

site_idAC8
Number of Residues7
Detailsbinding site for residue MG A 408
ChainResidue
AASP118
AADP406
ANA407
AHOH626
BASP43
BNA403
BTPP404

site_idAC9
Number of Residues9
Detailsbinding site for residue NA A 409
ChainResidue
AMG405
AHOH588
BADP401
BHOH569
BHOH571
BHOH636
AALA42
AASP43
AASP71

site_idAD1
Number of Residues30
Detailsbinding site for residue ADP B 401
ChainResidue
AASP43
AASP71
AARG143
ASER200
ATPP401
AMG402
AMG404
AMG405
ANA409
AHOH635
BPHE4
BILE7
BPHE11
BILE23
BGLY24
BASP25
BASP26
BLEU84
BGLY116
BGLY117
BASP118
BTHR119
BHOH506
BHOH509
BHOH561
BHOH569
BHOH571
BHOH574
BHOH575
BHOH600

site_idAD2
Number of Residues7
Detailsbinding site for residue NA B 402
ChainResidue
AASP43
ATPP401
AMG405
AHOH554
BASP118
BTHR120
BHOH587

site_idAD3
Number of Residues8
Detailsbinding site for residue NA B 403
ChainResidue
AADP406
AMG408
AHOH519
AHOH626
BALA42
BASP43
BHOH581
BHOH629

site_idAD4
Number of Residues30
Detailsbinding site for residue TPP B 404
ChainResidue
AASP118
AADP406
ANA407
AMG408
AHOH507
AHOH594
AHOH613
BASP43
BGLY48
BARG49
BHIS50
BPHE51
BPRO52
BLEU165
BLEU176
BSER200
BASP201
BGLY246
BASP248
BTYR250
BTYR301
BHIS303
BMG405
BMG406
BHOH510
BHOH521
BHOH541
BHOH558
BHOH560
BHOH624

site_idAD5
Number of Residues6
Detailsbinding site for residue MG B 405
ChainResidue
AADP406
BASP43
BASP71
BTPP404
BHOH558
BHOH624

site_idAD6
Number of Residues5
Detailsbinding site for residue MG B 406
ChainResidue
AHOH507
AHOH594
BASP201
BTPP404
BHOH521

site_idAD7
Number of Residues6
Detailsbinding site for residue MG B 407
ChainResidue
AASP26
AADP406
BASP71
BASP198
BHOH617
BHOH624

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon